Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2995 ATGGGTCGACCTGAACCATGCGTCCTCTTTGCTCAGACTTTCGTTCATCCCCATCTGGATGAGTATGTCGACGAGGTGATTTTTTCAGAACCCGTTGTCATAATTGCCTGTGAGTTTCTGGAACAGAGTGCATCTTCGGTTGCTCAATCAGTAACTCTCGTTGGGGCGACCTCACCTCCATCATTTGCTTTAGAGGTATTTGTTCATTGTGAGGGGGAGGCGAGGTTTAGGAGGCTTTGTCAGCCTTTTCTCTATTCTCACTCTTCATCAAATGTACTAGAAGTAGAGGCTGTCGTAACTAGCCATCTAGTAGTAAGGGGAAGCTATCGGAGTTTGAGCTTGGTTGTATATGGCAACACTGCAGAGGACCTGGGCCAGTTTAACATTGAATTTGATGACAGTGCATTGACCGATCTTGTTGATTCTACTGAGGGGAGGCTTGAAGACCTACCTCTTGCATTGAATTCTACTAATTTGGCCCTTGAAGACTCAATTTCTTCTTTGAATGTATTATCTATTCCAATTCCTTCGACAGACATTTCTGTTGAAGTCAAGCATTGTCTACAGATAATGATGAAGATTTTGGAGTTcttagatcttggggatgctgGACATAAAGTTGTAAGTACTGTAGTATCAGCAGTTTCTTCTTACATTTCCAGTGAAATATGTAAATCAATCAGAGGAAGATATCAGATGTCAGAGAAATCTGGGAAGTTTGAAGAGTTGCAGAGTGCTGTTAATGAAGCAAGAAAAGAGCTTCTTGAAGTTTATAAAGTTCTTCAATACAAATCAGGAAGTGCATCTTCTGAATGTTCATCAGAGGGCAGTTATTTTGAAACGGAGGCTGATATTTTGGATTCCAAAGAGTTGGTGGATATGTTTAATCAGTACTTTCATTTTAAAAGGAGATCTACATATGCAGGAGATTGTAGTCTTTCGCAGAGTGAGAATGTTCTTCTAGGATTGAGCATGGCTCTTCTACTGTGCTCTGGTAGAGAGAGCTGCTTTCATTTCGTTAATGGTGGCGGAATGGAGCAGCTTGTGATGTTTTTTTCCAAGGATCTGCAAAATTCAACTACTACTATGCTGTTGCTTCTTGGAGTTGTGGAGCAGGCTACCAGGTATTCAGTTGGTTGTGAAGGCTTTTTGGGTTGGTGGCCACGTGAAGAGGAAAATATTCCCACTGGTATAAGTGAAGGCTATAGCCAATTGTTGAAGTTGATATTGGCAAAACCTCGCCATGATATTGCGTCTCTTGCAACCTATTTGCTTAATAGACTACGATTTTATGAAGTTGCTTCAAGATATGAGTCTGCAGTTCTGTCTGTGTTGGGAAGCATCAGTACTGTTGGCAGGGTTACAAGTGCTACCTTGAACATGCTCACTACTGCAGGAATTCAACTCAAAAAGCTCCTGAAATTGATAAATTCACGTGGTCCAATTGAAGATCCTTCTCCCATGGCTTTTGGAAGCAGATCACTGATTACTGGTCAAACAGATGGATTGTTGTCATATAAAACCACTTCTGGCCTCATTAGCTCTTCAAGTTGTTGCTTTTCTGATTGGGATATTGATACACATTTGCTGGGACTTTTGAAGGAGCGGGGATTTCTTTCCTTATCTGCTGCACTGTTGTCATCGTCTGTATTGCGTGTGGAAGGGGGACATGCCATGGAAATATTTATGGATATTGCATCATCTATTGAAGCTGTGAttctctcatttcttttttgTCGTTCAGGCTTGATATTCCTGCTACAGGATCCTGAACTTTCAACTACTTTAATCCATGCCCTTAAGGGTGGTCATGTTGTCGACAGGGAAGATTGTGTTCCTCTTCGTTATGCATCTGTTTTGATATCCAAGGGTTTTTTATGCAGTCTGCTGGAGATAGGGATGATAGTTAGTTTGCATTTAAGGATGGTTAATGCTGTTGATCGTTTGCTTTCATCAAATCCACAGTCAGAAGAGTTTCTATGGGTTTTGTGGGAACTTTGTAGTCTCTCTAGGTCTAACTGTGGACGCGAAGCTTTGTTGGCTTTGGCATATTTTCCTGAGGTTGTTTCCATAATGATTGATGCATTAAGTTCCGTCAAGGAATCCGAATTTGTTGGGAAAAGTAGTGGTATTCAATCTGCTCTATTCCCTCTCATTTATGCTGAAATGGCAAGATTTCTTGTTTGCAGTTCTAAAATGGTTATGCTTACTATGTTGCATTCAGGATCGTCACCAGTAAATCTTACAATATTTCACTCTGCTGCTGAGATCATTGAAGTCATTGTTACAGACTCCACAGCATCATCTTTGGGTTCTTGGATTGGACATGCTATGGAACTTCATAGGGCCTTGCATATCTCCTCTCCTGGGTCTAATAGAAAAGATGCTCCCTCACGGCTGCTGGAATGGATTGATGCTGGTGTAGTTTACCACAAACATGGGGGCATCGGTCTACTTCGTTATGCTGCTGTATTGGCTTCTGGAGGTGATGTGCAGCTAACTTCAACGAGTATCCTAGTTTCAGATCTGAGTGATGTTGAGAATATTGTTGGAGAGTCTTCTGCTGGCTCTGATATTAATGTTATGGAGAATCTTGGGAAGTTCATATCTGAGAAGTCTTTTGATGGTGTTGCTCTTCGAGATTCTTCTCTGGCACAATTGACAACAGCATTTCGAATTTTGGCATTTATTTCTGAAAATCCAATTATTGCCGCTACTCTTTATGATGAAGGTGCTATAATAGTTATCTATGCTGTTTTAGTCAACTGCAGATTCATGCTTGAGCGGTCCTCAAACAACTATGATTACCTTGTGGATGACGGTACAGAATGCAATACTACATCAGATTTACTTTTGGAACGTGATCGTGAAAAGAGCATAGTTGATCTTTTGGTTCCTTCTCTGGTTCTATTGATTACACTTTTGCAAAAATTACAGGAAGCAAAAGAACAGCACCGAAATACGAAATTGATGAATGCTCTTCTCCGATTACACAGAGAGATAAGCCCCAAGCTGGCTGCATGTGCAGCAGACATATCCTCTCCATATCCTGATTATGCTATTGGTTTTGGAGCTGTCTGTCATCTCATTGTGTCAACACTTGCCTTTTGGCCAGTACATGGCTGGAGTCCTGGTCTTTTTAATACCCTTCTTGCTAGTGTTCAGGCTACTTCAATGCTGGCTTTAGGTCCAAAAGAAACATGCAGTTTGCTGTATCTTTTGAGTGATTTATTTCCTGAGGAagatatatggctttggactagTGGGATGCCTTTGCTAAGTGTCCGCAGAATTTTGGCTGTTGGGACAATATTAGGGCCCCAGAAGGAGAGACATGCCAACTGGTATCTGGAGTCTGGACACCTAGAGAAGTTGCTTTGCCAGTTGGCTCCACATCTTGACAAAATTGGCCAGATTATACAGCATTATGCTATTTCTGCATTAGTGGTCATTCAAGATCTCCTACGCGTGTTCATAGTTCGCATTGCTTTCCAAAACATTGATTATGCATCTATGCTTATGCGACCAGTATTGTCATCAATTATTCATCTTGTTTCTGAATCTTCCCCATCAGACACAGATGCATACAAGGTTTCCAGGctccttgattttcttgccagCTTATTGGAGCATCCCCTGGGCAAGGGCCTATTGTTAAGGGAGGGTGCTCTTCAGATGTTAACAAAAGTACTGGAAAGATGTTTTGTTGTTGATGATGTTGATGGAAAGCAAGCTCTTGACAGTAGAAGTTCAGCGAAGTATGACTTTAGTTTGAGTGACAGGGTCTGGTTTTTTGTTAGTGAAACTTATGGAAAAGTGAATATGGAAGATTGCTCACTGATTTTACAGTATATCTTGAAAAGTTGTCAGGTCCTGCCTGTCGGAAAAGAGTTAGTTGCTTCTCTTACAGCTTTCAGAGAATTAGCTTCTTGCAGTGAAGGTCAAAATGCTTTTGGAGCTATACTTGAACCTCGAAAAGATGAAAGGGATGTCAATTATAATGGTTATAGTGAAGTAGAATGGAGAAAATGTCCTCCTTTACTTAGCTGCTGGATGAAGTTGTTGAGATCAATTGATACACAAGAAGGTTTCTCAACCAGTGTGATTGAAGCTATCTATGCACTGTCAGTTGGGTCTCTGTTGTTTTGTATGGATGGGGAAAGGGTTGCTGTATTGAAGTACCTTTTTGGGCTTTCTGATGATAAGACAAGATCAACCGGCTTTCctgaagaaaatattaattacataGTAGAGTTAAATGCTTTGTTCAGTTCAAAGTTTACTGTGGATGACAATTTGGTTACATCTGACTCACAAACCTTATTATATCAgGCTTCCAAATCTGTCAAGTCAGTGTCCTTAATTTTGCAAAAGCCTGTTGGTTCAGTGAAGGTGGATGATGACGTTTTACCTCGAAATGATGTTTCAGTTTTTCCAAAGACACATGAAATGCTTGAAAACAGTGTTGAAAAGATTGATGATCATCTCAACCTTGGAGGACTTGGGGACAAATTTCTTTGGGAATGCCCAGAAACATTACCTGATAGATTGACACAGACAAATCTAGGTGCCAAAAGGAAACAGCCATCAATGGATGGGCATGCTAGGCGCGCTCGAGAAGGTTCTCAGGCTGAGATCTCTGCTCAAAATACTTTTTCACGGGGTATGGCCCAGTCAACTGTTTCTTCTGGTCCTACTCGAAGGGATGCCTTCCGGCAGCGCAAGCCAAATACCAGTAGACCACCTTCTATGCATGTGGATGACTATGTGGCAAGAGAGAGAAATGTAGAAGGTGTTACTAATGTAATAACAGTACCACGAACAGGATCGACTGGTGGGAGACCTCCATCAATTCATGTAGATGAATTTATGGCTAGACAAAGGGAACGCCAGAATCCTTCTGTAACAGTAGTAGGGGAGGCTGTGGGGCATCTAAAAAATGCTCCTGTGAATCCTACAGATGGGGAGAAGTTAAACAAATCTAAGCAATTAAAAACAGATCTTGATGATGATCTTCAAGGCATTGATATAGTTTTTGATGGCGAGGAGTCTGACCCTGATGACAAGTTGCCCTTCCCTCAGCCAGATGATAATTTGCCTGCCGCAATAATTGTAGAGCAAAGTTCTCCTCATTCAATTGTTGAAGAGACAGGAAGTGATGTTGTTGAGAGTAGTCAGTTTTCTCATATGGGTACTCCGTTAGGGTCTAACATTGATGAAAATGGCCAAAGTGAGTTTTCCTCAAAGATGTCAGTTTCACGTCCTGATATGCCATTAACTCGTGAGTCAAGTGTTTCATCAGACAGGAAGTACGTTGAACAGTCTGATGACTCAAAGAATGTTGTTCCTGCCAAATCTTCAGGTGGATATGATTCTACAGCAGCAACAAATATTTCAGGGTTTCCCGCTTCCCTTCACAATAATCTATCCACATCATCAATGCAGCTACCAGTTGATTCGAGGATGGCTTCCCAACATTTCTTTTTAAAGAACAGCCCACAACATGGTGGTAATGTTACAGTCACAGGTTCTCAAGGACTGTATGACCTGAGGTTTTTGCCTAACCAACCTCCTTTACCCCCCATGCCACCTCCACCAACGGTCTCACCTATAATATCACATGCTTCAGATTCAGTTCCTAGCCATTCATCCCCATTTGTTAACTCTCCAGCAGACACACAGCGTCATGGACCATTCCAGGTCCAGACAGACTATTCATCTCCATTCCACAACAGTTCAACTGCAACATCATTAGCATCTTCCCTTCCCATGCCTGATTCAAAGTATTCCAGGACTTCTATATCTTCTCCTAGTGGACCTAATAGGCCCCCTCCCCCCCTTCCTCCCACACCACCACCTTTTGCATCTAGTCCATATAATTTGCCAACTGGTAAAGCTTCTGCTTCACAACCTTCTGTTTATAATCAGACAAGTATTGGGGCAACTGAAGTTCCCCAAGCCTCAATTGCACATTCAAATGATGCCTGGCTAGGCAGTCATTCTGCTTCGGGGGCCAGATTGTCATCTTACCCTCCTAACCCATTAATGCCTTCCATGGGGTTCAGTAGGTCAGCATCCATCCCATTGGCTCTCTATGGTAATACCCCAAATCAGCAACAGAGTGAGAACCAGCCAAGCATGTTGCAAGGCATCTCCATTCCTCAAGCTTCCTTTCAGTCAATGCATTCTGTTACTCAGTTGCAGCCACTGCAGCCTCCCCAGCTCCCGCGCCCTCCACAACCACCACAGCACCTTAGGCCACCATCTCAAACTTTATTACAGTTGGAGCAAGGGATGGCTGTTCAAAGTGGAGTTCAAGTACATCAATTACAGATGCTGCAGCAGCCACAAGTTTCTCCAATGCAGACCGGTTTCCAAACACAGCAGCAAGAGTTCTCACATTCACAACAGCAAAAGCAAGTTGAATATACTCAACAAGGGGATGCTCAAATGCTGCAGCAACGAGATTCAGGAATGTCTTTACATGAGTATTTTAAGTCTCCCGAGGCAATTCAGTCTTTGTTGAGCGACCGTGACAAACTTTGCCAGCTCTTGGAGCAGCATCCGAAATTAATGCAGATGCTTCAGATAGAGGCAGGCATGCTAATGATGGAGAGTGGATGGAAGggtaatagtaatagtaatagtaatgTGGAGATATTATCACCAAACTGTCCGAGGTGTGGGTCTTGCAATACCAAGTTTTGTTACTACAACAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAGGCCTGCCGCAGATACTGGACCAAAGGCGGATCCCTCCGCAACGTCCCCGTCGGTGGCGGCTGCCGCAAGACCAGACGTAGTAAGACttgttcttcctcctcctccatcCATCCACCTTCAACACACACCCATTTAATTCATTCCACAACGACTCATCTATCATCTTCctctaattctaattctaattcttcTACAACCTCTACTGATGCTCCCAACATTGATCTCGCACTTGTCTATGCCAATTTCCTCAATCAAAAGCCTCTGCCTCTgcctaattataataatatttatgatgatgatgatggtgatgctTGTGTGAGTACTGTGGAGtataattacaataattattCGAGTGATCATCATGGCACACAAGTAAGTACTGCCACTGGTAGTGATCATGATGAGCAACAAATGAAGTTTTACAAGaataatgaagaagaagaagaagaaggattaATAGAGCAGAATTATTGCAGTAGTGGTAGCATTGATGTTCATCATAATATGAATTTTGAGTTGCCACCATTGCCAGGGGAAGAGACTTGTGTAGTAGCTGCTGCCTTACATGATGATGATCATCATCATATGATGTGGTCctccaataataataacaatacttCTGCCTTCCACTCCCAACCTTTTGATGCAGACTTGTTATTCAATGATTGGACTCCCTTTGACTTTCCAAGGCCTTGA 7449 0.4103 MGRPEPCVLFAQTFVHPHLDEYVDEVIFSEPVVIIACEFLEQSASSVAQSVTLVGATSPPSFALEVFVHCEGEARFRRLCQPFLYSHSSSNVLEVEAVVTSHLVVRGSYRSLSLVVYGNTAEDLGQFNIEFDDSALTDLVDSTEGRLEDLPLALNSTNLALEDSISSLNVLSIPIPSTDISVEVKHCLQIMMKILEFLDLGDAGHKVVSTVVSAVSSYISSEICKSIRGRYQMSEKSGKFEELQSAVNEARKELLEVYKVLQYKSGSASSECSSEGSYFETEADILDSKELVDMFNQYFHFKRRSTYAGDCSLSQSENVLLGLSMALLLCSGRESCFHFVNGGGMEQLVMFFSKDLQNSTTTMLLLLGVVEQATRYSVGCEGFLGWWPREEENIPTGISEGYSQLLKLILAKPRHDIASLATYLLNRLRFYEVASRYESAVLSVLGSISTVGRVTSATLNMLTTAGIQLKKLLKLINSRGPIEDPSPMAFGSRSLITGQTDGLLSYKTTSGLISSSSCCFSDWDIDTHLLGLLKERGFLSLSAALLSSSVLRVEGGHAMEIFMDIASSIEAVILSFLFCRSGLIFLLQDPELSTTLIHALKGGHVVDREDCVPLRYASVLISKGFLCSLLEIGMIVSLHLRMVNAVDRLLSSNPQSEEFLWVLWELCSLSRSNCGREALLALAYFPEVVSIMIDALSSVKESEFVGKSSGIQSALFPLIYAEMARFLVCSSKMVMLTMLHSGSSPVNLTIFHSAAEIIEVIVTDSTASSLGSWIGHAMELHRALHISSPGSNRKDAPSRLLEWIDAGVVYHKHGGIGLLRYAAVLASGGDVQLTSTSILVSDLSDVENIVGESSAGSDINVMENLGKFISEKSFDGVALRDSSLAQLTTAFRILAFISENPIIAATLYDEGAIIVIYAVLVNCRFMLERSSNNYDYLVDDGTECNTTSDLLLERDREKSIVDLLVPSLVLLITLLQKLQEAKEQHRNTKLMNALLRLHREISPKLAACAADISSPYPDYAIGFGAVCHLIVSTLAFWPVHGWSPGLFNTLLASVQATSMLALGPKETCSLLYLLSDLFPEEDIWLWTSGMPLLSVRRILAVGTILGPQKERHANWYLESGHLEKLLCQLAPHLDKIGQIIQHYAISALVVIQDLLRVFIVRIAFQNIDYASMLMRPVLSSIIHLVSESSPSDTDAYKVSRLLDFLASLLEHPLGKGLLLREGALQMLTKVLERCFVVDDVDGKQALDSRSSAKYDFSLSDRVWFFVSETYGKVNMEDCSLILQYILKSCQVLPVGKELVASLTAFRELASCSEGQNAFGAILEPRKDERDVNYNGYSEVEWRKCPPLLSCWMKLLRSIDTQEGFSTSVIEAIYALSVGSLLFCMDGERVAVLKYLFGLSDDKTRSTGFPEENINYIVELNALFSSKFTVDDNLVTSDSQTLLYQASKSVKSVSLILQKPVGSVKVDDDVLPRNDVSVFPKTHEMLENSVEKIDDHLNLGGLGDKFLWECPETLPDRLTQTNLGAKRKQPSMDGHARRAREGSQAEISAQNTFSRGMAQSTVSSGPTRRDAFRQRKPNTSRPPSMHVDDYVARERNVEGVTNVITVPRTGSTGGRPPSIHVDEFMARQRERQNPSVTVVGEAVGHLKNAPVNPTDGEKLNKSKQLKTDLDDDLQGIDIVFDGEESDPDDKLPFPQPDDNLPAAIIVEQSSPHSIVEETGSDVVESSQFSHMGTPLGSNIDENGQSEFSSKMSVSRPDMPLTRESSVSSDRKYVEQSDDSKNVVPAKSSGGYDSTAATNISGFPASLHNNLSTSSMQLPVDSRMASQHFFLKNSPQHGGNVTVTGSQGLYDLRFLPNQPPLPPMPPPPTVSPIISHASDSVPSHSSPFVNSPADTQRHGPFQVQTDYSSPFHNSSTATSLASSLPMPDSKYSRTSISSPSGPNRPPPPLPPTPPPFASSPYNLPTGKASASQPSVYNQTSIGATEVPQASIAHSNDAWLGSHSASGARLSSYPPNPLMPSMGFSRSASIPLALYGNTPNQQQSENQPSMLQGISIPQASFQSMHSVTQLQPLQPPQLPRPPQPPQHLRPPSQTLLQLEQGMAVQSGVQVHQLQMLQQPQVSPMQTGFQTQQQEFSHSQQQKQVEYTQQGDAQMLQQRDSGMSLHEYFKSPEAIQSLLSDRDKLCQLLEQHPKLMQMLQIEAGMLMMESGWKGNSNSNSNVEILSPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRSKTCSSSSSIHPPSTHTHLIHSTTTHLSSSSNSNSNSSTTSTDAPNIDLALVYANFLNQKPLPLPNYNNIYDDDDGDACVSTVEYNYNNYSSDHHGTQVSTATGSDHDEQQMKFYKNNEEEEEEGLIEQNYCSSGSIDVHHNMNFELPPLPGEETCVVAAALHDDDHHHMMWSSNNNNNTSAFHSQPFDADLLFNDWTPFDFPRP 2482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1871 1937 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1715 1791 - -
Sto13g2995 2482 ProSiteProfiles Zinc finger Dof-type profile. 2223 2277 IPR003851 GO:0003677|GO:0006355
Sto13g2995 2482 MobiDBLite consensus disorder prediction 2276 2319 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1855 1870 - -
Sto13g2995 2482 PANTHER UNCHARACTERIZED 1 2188 IPR026736 -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1855 1973 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 2268 2319 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1543 1567 - -
Sto13g2995 2482 Pfam Virilizer, N-terminal 8 122 IPR031801 -
Sto13g2995 2482 ProSitePatterns Zinc finger Dof-type signature. 2225 2261 IPR003851 GO:0003677|GO:0006355
Sto13g2995 2482 MobiDBLite consensus disorder prediction 2071 2086 - -
Sto13g2995 2482 Pfam Dof domain, zinc finger 2224 2277 IPR003851 GO:0003677|GO:0006355
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1518 1589 - -
Sto13g2995 2482 Coils Coil 233 253 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1938 1958 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 2059 2088 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 1715 1765 - -
Sto13g2995 2482 MobiDBLite consensus disorder prediction 2121 2144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2995 Sto-Chr13 34767814 34786924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2995 2208 2479 C2C2-Dof Transcription Factor Family AT3G52440 37.755 5.89e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto13g2995 VIR_N 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2995 - - aprc:113870921 3153.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2995 13 34767814 34786924 Sto13g2995 13 34767814 34786924 ECH