Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2103 ATGGCGGAAGTGGAAAACGGGCATCAAGAGGGGATTAAGCTATTCGGGGCTATGATAACGTTACACCAGAAATTAGAGGGATCGTCAGATCAAGATCAGGATCAGGATCAGGAGGATGATCAAGATCGGACGGCGGAGAAGAGGCCAGATAAGATCATAGCGTGCCCCAGATGCAAGAGCATGGAAACCAAGTTTTGTTACTTCAACAATTACAACGTCAACCAGCCTCGCCATTTCTGCAAGGGCTGCCAGAGGTACTGGACGGCCGGCGGCGCACTCCGCAACGTCCCCGTGGGGGCCGGCCGCCGCAAGGCCAAGCCCCCAACATGCCCCGGGGCCCATCAAGAATCACAGAGGTTGATGGTGGAGGAGTGGCATGCCGCCATGGCTCACACCGACTTCCGGAAGCTTTTGCCGGCCAAACGCCGGAGGACCAACTCAGGCGGAGTGCGATCCACGAAATTAAAAGTCACACCGTAg 480 0.5604 MAEVENGHQEGIKLFGAMITLHQKLEGSSDQDQDQDQEDDQDRTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPPTCPGAHQESQRLMVEEWHAAMAHTDFRKLLPAKRRRTNSGGVRSTKLKVTP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2103 159 Pfam Dof domain, zinc finger 51 106 IPR003851 GO:0003677|GO:0006355
Sto13g2103 159 PANTHER CYCLIC DOF FACTOR 2 7 148 IPR045174 GO:0003700|GO:0006355
Sto13g2103 159 ProSitePatterns Zinc finger Dof-type signature. 55 91 IPR003851 GO:0003677|GO:0006355
Sto13g2103 159 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 7 148 - -
Sto13g2103 159 ProSiteProfiles Zinc finger Dof-type profile. 53 107 IPR003851 GO:0003677|GO:0006355
Sto13g2103 159 MobiDBLite consensus disorder prediction 23 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2103 Sto-Chr13 28083036 28084992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2103 10 149 C2C2-Dof Transcription Factor Family AT2G34140 57.143 3.85e-55 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto13g2103 zf-Dof 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2103 - - gmx:100527802 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2103 13 28083036 28084992 Sto13g2103 13 28083036 28084992 ECH