Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0102 ATGCCAGTGGCTACGCCAGAGACATCCGATGCTAGAATTATTACTCACGTAGACATGGATTGCTTCTACGTTCAAGTTGAACAGCGAAAGCAGCAAAATTTAAGAGGCTTACCCACTGCCGTTATTCAGTACAACTCATATAAAGGTGGGGCCTTAATCGCTGTGAGCTATGAGGCCCGTAAATTTGGTGTGAAGCGTTCTATGAGGGGTGACGAAGCAAAGGAGGTTTGCCCCCAAATTCAACTGGTTCAAGTCCCAGTAGCACGTGGTAAAGCTGATCTTAACGCATATAGGAATGCAGGTTCAGAGGTTATTTCGGTTCTTGCAAGGAAAGGCCGATGCGAGAGGGCTTCAATTGATGAAGTGTATCTTGACCTCACTGATGCTGCTGAAACAATGTTAAAGGAAGCAGCTCCTGAAAATTTGGATGATATTGAGGAGGAAGTTCTCAAATCACATGTTTTGGGCCTCCATAATGAGgatgGAACTGATGCCAAAGAAGAAGTTAGGAAGTGGCTTTGTAGGAGTGATGCCGATTACCATGATAAGCTATTAGCTTGTGGGGCCATCATTGTTGCTGAACTCAGGATGCAAGTATTGAAAGAGACTGAATTCACTTGTTCTGCTGGTATTGCTCATAACAAGATGCTGGCTAAACTTGCTAGTGCTATGAACAAACCTGCACAACAAACTGTTGTACCACGATCATCTGTCAACGGATTGCTTGAGTCTTTTCCAATTAAGAAAATGAAACAGCTTGGGGGAAAGCTGGGAAGTTCCTTGCAAACTGATCTTGGTGTCAACACTGTCGGTGACTTACTTAAGTTTTCAGAGGACAAGCTACAACGACGATATGGGATCAATACTGGTACTTGGTTGTGGAATATTGCAAGAGGAATCAGTGGGGAAGAAGTGGAGGGGCGTCTGCTTCCCAAGAGCCATGGTTCTGGCAAGACATTTCCTGGGCCCCAGGCTTTGAAGACTATTGCTTCGGTTCAGCACTGGCTTAATCAACTGTGCGAAGAGCTAAGTGATCGTCTTCATTCTGACTTGGATCAAAATAAACGGATTGCACACACACTGACTTTGCATGCTAGAGCATATAAGACGGGCGATTCAGATTCACATAAAAAGTTCCCTTCTAAATCTTGCCCTTTAAGATATGGAACTACAAAGATTCAAGAAGATGCTCTAAATCTATTTCAAGCTGGATTACGTGAATATATTGGCTTTTGCAACAATAAGATTCAAGGAACCCAAAACAACAGTTGGGGAATAACTTCACTTGCTGTTTCTGCTAGTAAAATTGTCCCCATTCCATCTGGGACACATTCAATTGTTAAATACTTTGGTGGGCAATTGCCATCCCGCTCATCTTCAAAACTGCCACGGGATAATGTCATCGAAGAAGCTACGCCACTGTCACCTTCAGGTAGTGAAAGTTGTTCAGGATTGAATTCATATGAGTCACAGCTAGAATATTCTGAAGAAGACGCAAAAATGAAGTATTTAAAGGCTAGTTTTGGTCAACAGGACCCGTCTGGCAACTCATCCAGGCAAGGAGATGGCTTGACTGAAGAATCTTCCCTTTTGTCACCCCAAGgaaatgaaaatagaatgacaCAGGGAGAGCCACGACAGGAGTTTCCTGAGGAAGAACCTAGGCGCATTCACAGTATGCCTAGATTGAAAgcgattgaaaagaaaaatacagcCAAAGAGAAGGGTAGTTGttcaattttaaaacttttcaaGAATTACCATGACCCCTCCACATCATTGGAGCAGAAGCACGCTGCAAATGCCGAGGGTGCAAAAACATCATCAATTGGATCTGAGTTTACAAGCAATAGTTATTCAACATGTAATCAAGTTGAGCTACCAAAAGAGACTCATTGTGAAGAGATTGAAACAAGCAATGGTGGTGGAAGTAGTAGTTCAGCAGCTCATGTGCCACAAGGAAGACAATCATGGAGTTACAAAATTGATGAGATTGATCCCTCAATTGTTGATGAATTACCACCAGAAATTCAACAAGAGGTTAGAGCCTGGCTTAGGCCCCTCAAGAGGCCAAATGTGGTTAAAAGAGGTTCTAGTATTACTCACTATTTCCATCCTAACAAATAG 2127 0.4184 MPVATPETSDARIITHVDMDCFYVQVEQRKQQNLRGLPTAVIQYNSYKGGALIAVSYEARKFGVKRSMRGDEAKEVCPQIQLVQVPVARGKADLNAYRNAGSEVISVLARKGRCERASIDEVYLDLTDAAETMLKEAAPENLDDIEEEVLKSHVLGLHNEDGTDAKEEVRKWLCRSDADYHDKLLACGAIIVAELRMQVLKETEFTCSAGIAHNKMLAKLASAMNKPAQQTVVPRSSVNGLLESFPIKKMKQLGGKLGSSLQTDLGVNTVGDLLKFSEDKLQRRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQALKTIASVQHWLNQLCEELSDRLHSDLDQNKRIAHTLTLHARAYKTGDSDSHKKFPSKSCPLRYGTTKIQEDALNLFQAGLREYIGFCNNKIQGTQNNSWGITSLAVSASKIVPIPSGTHSIVKYFGGQLPSRSSSKLPRDNVIEEATPLSPSGSESCSGLNSYESQLEYSEEDAKMKYLKASFGQQDPSGNSSRQGDGLTEESSLLSPQGNENRMTQGEPRQEFPEEEPRRIHSMPRLKAIEKKNTAKEKGSCSILKLFKNYHDPSTSLEQKHAANAEGAKTSSIGSEFTSNSYSTCNQVELPKETHCEEIETSNGGGSSSSAAHVPQGRQSWSYKIDEIDPSIVDELPPEIQQEVRAWLRPLKRPNVVKRGSSITHYFHPNK 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0102 708 Pfam impB/mucB/samB family C-terminal domain 311 439 IPR017961 GO:0003684|GO:0006281
Sto13g0102 708 Gene3D - 89 233 IPR043128 -
Sto13g0102 708 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 310 438 IPR036775 GO:0003684|GO:0006281
Sto13g0102 708 MobiDBLite consensus disorder prediction 508 562 - -
Sto13g0102 708 PANTHER DNA POLYMERASE ETA 6 692 - -
Sto13g0102 708 MobiDBLite consensus disorder prediction 637 654 - -
Sto13g0102 708 Gene3D - 247 303 - -
Sto13g0102 708 Pfam impB/mucB/samB family 17 222 IPR001126 GO:0006281
Sto13g0102 708 MobiDBLite consensus disorder prediction 544 562 - -
Sto13g0102 708 PANTHER DNA POLYMERASE ETA 6 692 - -
Sto13g0102 708 PIRSF DNA_pol_eta 6 704 - -
Sto13g0102 708 Gene3D - 21 88 - -
Sto13g0102 708 ProSiteProfiles UmuC domain profile. 14 254 IPR001126 GO:0006281
Sto13g0102 708 MobiDBLite consensus disorder prediction 509 543 - -
Sto13g0102 708 Gene3D - 305 437 IPR036775 GO:0003684|GO:0006281
Sto13g0102 708 SUPERFAMILY DNA/RNA polymerases 8 305 IPR043502 -
Sto13g0102 708 MobiDBLite consensus disorder prediction 632 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0102 Sto-Chr13 846378 853360 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0102 13 846378 853360 Sto13g0102 13 846378 853360 ECH