Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0088 ATGGGGCACCTCTTGATAAATGTTGATGCATTGGATAACAGCCTGGATATAGACATTGATGATATAAGATATCAAAATATAGAGGAGAAAGATGTCAGtgatgaagaaattgaagcagaAGAATTGGAGAGGCGGATGTGGAAAGATCGCATCAAGCTCAAGAGGGTCAAGGAAAGGCAGAAGCTTGCAGCACTGCAAGCAGAGAAGCAAAAGCCCAAGCAGACCACTGATCAAGCTCGCAGGAAGAAAATGTCTAGAGCACAAGATGGGATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAGAAGGGTAAGCCAGTGAGTGGGGCTTCGGATAACATTAGAGCTTGGTGGAAAGAGAAGGTGAAGTTTGATAAGAATGGACCTGCAGCCATAGCCAAGTATGAAGCTGAGTGTCTTGCTATGAGTGAGGCTGATAACCGAAATGGGAATACTCAGAGTACTCTTAATGACCTGCAGGATGCAACTCTTGGTTCACTTTTATCTTCTTTAATGCAACATTGTAATCCGCCTCAGAGGAAGTACCCTTTGGAAAAGGGTATTCCTCCACCTTGGTGGCCAACTGGAAATGAAGATTGGTGGGTTCAGTTGGGTTTGCCACATGGTCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTCGGAGTGTTGACTGCTGTAATTAAGCACATGTCACCTAATATTGCAAAAATAAGGAGGCATGTACGCCAGTCCAAATGCTTGCAAGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTAAGTCAAGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGATAATGTTAATGTAAGCAGGAATACTACTAATAATGTAGTCCAGGATAAAGAGCAAGCAGATAAGCAACCCCGGAAGAAAAGACCCCGTTTAAGGCCAAGCACCACTGACGAACTACCTGCACCATCTCACAATGAAACTCTAAATGTTGAGGCAAGAAGCGCTCTGCTCAATGTAAACCACCCTGAAGCACACATAGTTGGACTCCAGATTCACAGAAATGAACAGGGTAACGAGACAGATTCTGCTTTGAGACCATTAGAAAAGGGTATTGAGATGCCAACTCAACTACCAGCATCTGAATTTGATCATTATTCATATTTCCGTCCAAGCAACATATTTTCTACAGAGACCATGTATATGAACGGAAGGCCGTCGCAATATCCTGCTGTGCAAAACCCTGATATGCATCATGAAGCTACTTATAACTTTTATAACTCAGTCACAGGATTTGGGCCAGGACATAACGAGCTGCAGCTGCAGTCTATAAACCGTGAACCAACTAAGCAAGTGAACAATGCAGTCCCTATGCCAGTAGTACATGCGAAAGGGGATGAGATTGCTGGAGGAGATTTACAATATTATGGAAAAGATACATTTCAAAACGAAGTTGATAGACCTGAAGACTTATTTGGATCACCAATTAATAGCTTGTCATTGGACTTTGGTGGCCTCAACAGTCCACCTTTCCATCTTGATGATTTCTTGGGCGatgaggagataatccagtaCTTTGGGGCATAG 1623 0.4202 MGHLLINVDALDNSLDIDIDDIRYQNIEEKDVSDEEIEAEELERRMWKDRIKLKRVKERQKLAALQAEKQKPKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNRNGNTQSTLNDLQDATLGSLLSSLMQHCNPPQRKYPLEKGIPPPWWPTGNEDWWVQLGLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSQEEALIRQPSSDNVNVSRNTTNNVVQDKEQADKQPRKKRPRLRPSTTDELPAPSHNETLNVEARSALLNVNHPEAHIVGLQIHRNEQGNETDSALRPLEKGIEMPTQLPASEFDHYSYFRPSNIFSTETMYMNGRPSQYPAVQNPDMHHEATYNFYNSVTGFGPGHNELQLQSINREPTKQVNNAVPMPVVHAKGDEIAGGDLQYYGKDTFQNEVDRPEDLFGSPINSLSLDFGGLNSPPFHLDDFLGDEEIIQYFGA 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0088 540 MobiDBLite consensus disorder prediction 292 338 - -
Sto12g0088 540 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Sto12g0088 540 MobiDBLite consensus disorder prediction 292 310 - -
Sto12g0088 540 Pfam Ethylene insensitive 3 40 285 IPR006957 GO:0005634
Sto12g0088 540 MobiDBLite consensus disorder prediction 311 327 - -
Sto12g0088 540 Gene3D - 73 149 IPR023278 GO:0003700|GO:0005634
Sto12g0088 540 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Sto12g0088 540 MobiDBLite consensus disorder prediction 64 84 - -
Sto12g0088 540 Coils Coil 25 68 - -
Sto12g0088 540 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 296 538 IPR006957 GO:0005634
Sto12g0088 540 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 296 IPR006957 GO:0005634
Sto12g0088 540 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 1 296 - -
Sto12g0088 540 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 296 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0088 Sto-Chr12 580533 582320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0088 20 540 EIL Transcription Factor Family AT1G73730 49.740 2.38e-168 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Sto12g0088 EIN3 1.3e-126 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0088 12 580533 582320 Sto12g0088 12 580533 582320 ECH