Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1618 ATGGAGGGGATGGAGAAAGATTGTGAGAGGAGGGTTGAGGGCGACTATAGTAAGGAAGTATGTGACTGCCCGCACTGCCCATGCACCATGCGTATGCCTCGCCACTTCTGCAAGACGTGTCGCCGTTACTGGACCAAAGGTGGCGCTCTCAGAAATGTTCCCATCGGAGGCGGCTGCCGCAAGAACAAGTCCGTTAGCGGCAGCGGCATCGGCATCATATCGAGCTCCGTGGCCAAGTCCTCGGCTAAGATCAAAACGgtgtcgtcttcttcttctccttctccaggaggtggtggtggGGCGAGCCAtggtcaaaaccctaaccctagccCTAGCCCTAGCCATAGTCTGTGTCTCAGCAATCCCATGATGTCCAATAATAATAACGCTATGGGTGTGAGTGTGAAGGAAGAAGGGTGCTTGATGGTGTCCTCCCACATGGTGGGGACTACTGAGCCCATGGGCTGCTCAAATAACGGAAGCCCGGGCTTTGATCCCACGGGCTCTTTCTGGAGAAGCAATCAAGATTTTCATCAACAACAACACCAAAACATGGGCTTTGTAGTGGGGTACTGGAATAATAATCAACCTCTCTCTGGCTGGTCTGATCTTCCCACAACCAATGGTGCATCAGCATATCCGTAA 645 0.4729 MEGMEKDCERRVEGDYSKEVCDCPHCPCTMRMPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSVSGSGIGIISSSVAKSSAKIKTVSSSSSPSPGGGGGASHGQNPNPSPSPSHSLCLSNPMMSNNNNAMGVSVKEEGCLMVSSHMVGTTEPMGCSNNGSPGFDPTGSFWRSNQDFHQQQHQNMGFVVGYWNNNQPLSGWSDLPTTNGASAYP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1618 214 MobiDBLite consensus disorder prediction 84 121 - -
Sto11g1618 214 Pfam Dof domain, zinc finger 31 64 IPR003851 GO:0003677|GO:0006355
Sto11g1618 214 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 33 191 IPR045174 GO:0003700|GO:0006355
Sto11g1618 214 ProSiteProfiles Zinc finger Dof-type profile. 10 64 IPR003851 GO:0003677|GO:0006355
Sto11g1618 214 PANTHER F-BOX FAMILY PROTEIN 33 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1618 Sto-Chr11 15156141 15165536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1618 7 63 C2C2-Dof Transcription Factor Family AT2G37590 48.529 1.03e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto11g1618 zf-Dof 9.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1618 - - pxb:103956185 104.375