Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1516 ATGGAAACTAGCTCGCTTACCAAATTGCTACTTGTATTTTGGTTATTGGCTTTGTGCTTTGGTTCTCATATGGGTCACTCTAGTGTGACCTATGATCGAAAAGCCATTATCATCAATGGCCAAAGAAGAATTCTTTTCTCTGGCTCCATTCATTATCCAAGAAGCACCCCTCAAATGTGGGAACATCTGATTCGCAAGGCTAAACGTGGAGGTCTTGATGTGATTGAAACCTACGTCTTCTGGAACGTTCACGAGCCTTTTCCTGGCAATTACAACTTTCAAGGCAGATATGATTTGGTGAGATTCATAAAGACAATACAAAAGGCCGGGCTTTATGCCCATCTTCGCATTGGACCTTATATATGTGGTGAATGGAATTTTGGAGGATTCCCTGTTTGGCTAAAGTACGTTCCGGGCATAAGCTTTAGAACAGACAATGAACCCTTCAAGAGGGCAATGCAAGGTTTCACTGAGAAGATTGTGGGAATGATGAAGAGTGAAAACCTTTTTGAATCCCAGGGTGGCCCCATCATACTCTCTCAGATTGAGAATGAGTATGGGGAACAAAGTAAGCTACTTGGAGCTGCAGGTCAAAACTATATGAACTGGGCTGCAAAAATGGCTGTCCAAATGGGAACTGAGGTCCCATGGATCATGTGCAAGGAAGAAGATGCACCAGACCCAGTGATAAATTCATGTAATGGCTTTTACTGTGATAAATTTACTCCCAATAGACCCTATAAGCCTAAGATTTGGACAGAGGCTTGGAGTGGCTGGTTTACAGAATTTGGAGGTCCGATTCACAAACGACCTGTCCAAGATTTGGCATTTGCAGTCGCTCGATTCATACAAAAAGGAGGATCGTTTGTAAACTACTACATGTATCATGGAGGAACCAATTTTGGACGTACAGCTGGTGGACCTTTCATCACTACCAGCTATGACTATGATGCACCTGTAGATGAATATGGTTTAATCAGGCAACCGAAATACGGTCATCTAAAGGAGCTTCATAGAGCTATCAAGATGTGCGAGCGAGCTTTAGTTTCAGTTGACCCCATTGTTACATCATTAGGGACTTTCCAACAGGCTCATGTTTACTCTACAGAATTTGGAGATTGTGCTGCTTTTCTCTCAAACTTTGATACAAAATCATCTGTCAGAGTGATGTTTAATAATATGCACTACAACTTGCCTCCTTGGTCCATTAGCATTCTTCCTGATTGCAGAAATGTTGTCTTCAATACAGCAAAAGTTGGAGTGCAGACATCTCAGATGCAAATGTTGCCAACAAATACTACTGTGTTTTCATGGGAAAGTTTTGATGAAGATACTTTTTCTTTGGATGATAGCTCCAGAATCAATGCTCCTGGCCTCTTGGAACAAATAAACGTGACACGAGACACGAGTGATTATCTTTGGTACATAACTAGTGTTGATGTAGGTTCATCTGAATCCTTTTTACATGGAGGAGAACTTCCTACTCTCATTGTTCAGTCCACAGGCCATGTTGTTCATGTTTTCATCAATGGTCAACTTTCTGGATCTGCCTTTGGAACAAGAAAGAATAGAAGATTCACATATAACGGAAAGGTTAACCTTCGTGCCGGAACAAACAGAATTGCTTTACTCAGTGTTGCTGTTGGACTTCCAAATGTAGGAGGACATTTTGAAACATGGAACACAGGAATCCTAGGTCCAGTTGTACTCTATGGACTTGACAAGGGGAAGTGGGACTTGTCCTATCAGAAATGGACTTATAAGGTTGGCCTAAAAGGAGAGGTCATGAATCTTGCTTCTCCAAATGGTATTTCTTCTGTTGAGTGGATGCATTCAGCACTTGTTGTACAAAAGAAGCAGCCATTGACATGGCATAAGGCTTACTTCAATGCTCCTAAAGGAGATGAACCATTGGCTCTAGATATGAAGGGAATGGTCAAAGGTCAAATATGGATTAATGGGAAGAGTATTGGAAGATATTGGACTGCTTTGGCAACTGGTAATTGTAACAACTGCAGCTACCTTGGGTCTTTCAGGCCTAAAAAGTGCCAGCTCGGCTGTGGCGAACCAACACAACGATGGTATCACATACCTCGGTCTTGGTTGAAGGCAAAACAAAATTTGTTGGTGATTTTGGAGGAAATAGGGGGAGATCCATCAAGAATTTCACTTGTGAAGAGATCAGTGAGCAGTGTATGTGGTGATGTTTCAGAGCACTACCCAAATATTAAGAATTGGCACATTAAGAGGTATGGGAATTCACAAGAGTTTCATCCACCAAAAGTTCATCTCCATTGTAGTGTTGGCCAAGTCATCTCTTCCATTAAATTTGCAAGCTTTGGGACTCCTCTGGGGACTTGTGGGAATTATGAGCTAGGAACCTGTCATTCTCCCACATCATACACCATTTTACACAAGAAATGTATAGGAAAGCGAAAATGCAGAGTGGCTGTATCAAACAGTAACTTTGGGGAAGACCCATGTCCAAATGTTTTGAAGAAGTTATCAGTTGAAGCTATTTGTGCTCCAATTCATAGGAGGGGTTGA 2547 0.4166 METSSLTKLLLVFWLLALCFGSHMGHSSVTYDRKAIIINGQRRILFSGSIHYPRSTPQMWEHLIRKAKRGGLDVIETYVFWNVHEPFPGNYNFQGRYDLVRFIKTIQKAGLYAHLRIGPYICGEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVGMMKSENLFESQGGPIILSQIENEYGEQSKLLGAAGQNYMNWAAKMAVQMGTEVPWIMCKEEDAPDPVINSCNGFYCDKFTPNRPYKPKIWTEAWSGWFTEFGGPIHKRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPVDEYGLIRQPKYGHLKELHRAIKMCERALVSVDPIVTSLGTFQQAHVYSTEFGDCAAFLSNFDTKSSVRVMFNNMHYNLPPWSISILPDCRNVVFNTAKVGVQTSQMQMLPTNTTVFSWESFDEDTFSLDDSSRINAPGLLEQINVTRDTSDYLWYITSVDVGSSESFLHGGELPTLIVQSTGHVVHVFINGQLSGSAFGTRKNRRFTYNGKVNLRAGTNRIALLSVAVGLPNVGGHFETWNTGILGPVVLYGLDKGKWDLSYQKWTYKVGLKGEVMNLASPNGISSVEWMHSALVVQKKQPLTWHKAYFNAPKGDEPLALDMKGMVKGQIWINGKSIGRYWTALATGNCNNCSYLGSFRPKKCQLGCGEPTQRWYHIPRSWLKAKQNLLVILEEIGGDPSRISLVKRSVSSVCGDVSEHYPNIKNWHIKRYGNSQEFHPPKVHLHCSVGQVISSIKFASFGTPLGTCGNYELGTCHSPTSYTILHKKCIGKRKCRVAVSNSNFGEDPCPNVLKKLSVEAICAPIHRRG 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1516 848 SUPERFAMILY Galactose-binding domain-like 583 748 IPR008979 -
Sto11g1516 848 Gene3D Glycosidases 26 345 - -
Sto11g1516 848 Gene3D - 432 572 - -
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 Pfam Galactose binding lectin domain 764 841 IPR000922 GO:0030246
Sto11g1516 848 Gene3D - 600 734 - -
Sto11g1516 848 Gene3D - 753 847 IPR043159 -
Sto11g1516 848 Pfam Glycosyl hydrolases family 35 36 340 IPR031330 -
Sto11g1516 848 SUPERFAMILY Galactose-binding domain-like 403 574 IPR008979 -
Sto11g1516 848 PANTHER BETA-GALACTOSIDASE 3 11 837 - -
Sto11g1516 848 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Sto11g1516 848 PANTHER BETA-GALACTOSIDASE RELATED 11 837 IPR001944 GO:0004553|GO:0005975
Sto11g1516 848 ProSiteProfiles SUEL-type lectin domain profile. 760 842 IPR000922 GO:0030246
Sto11g1516 848 SUPERFAMILY (Trans)glycosidases 25 345 IPR017853 -
Sto11g1516 848 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1516 Sto-Chr11 14359397 14363823 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0189 5 1115177 1119212 Sto11g1516 11 14359397 14363823 ECH
Sto9g3661 9 35076366 35080700 Sto11g1516 11 14359397 14363823 ECH
Sto11g1516 11 14359397 14363823 Sto11g1516 11 14359397 14363823 ECH