Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1468 ATGCCTCTCTTCTCACTTCACTATTCTCATCAACATTCTTCTGAAATCATCTTCGCTTTCTTAACGTTTCTTCTTTTCCAAGGGGTTTCAGTTTCAGGCACTACATTTACGTTTGTGAATAAGTGCGACTACACAGTATGGCCAGGAGCCTTAGGAAAACCGGATCTCGGAACCACCGGCTTCCAACTATCCAAGGCCTCTTCTCGAACCTTCCAGGCTCCAACCGCCTGGTCCGGTAGATTCTGGGCCCGAACCGATTGCAAATTCGACGATTCAGGCCGTGGTTCTTGCGCCACCGCTGACTGCGGCTCCGGCGGCATCGACTGCGGCGGCGCTGGAGCCACGCCGCCCGCCACGCTCGCCGAGTTCACTCTCGGCTCCGCCGGCGCACAGGACTACTATGACGTCAGCCTCGTCGACGGCTACAATCTGCCGATGATGGTGGAGGCAAAGGGAGGGTCGTCGGGATCGTGCGAGACGACCGGGTGCGTGGCGGATCTGAACCGGCGGTGTCCGTCGGAGTTGAGAACGGAGGGCGGCGACGCGTGTAAGAGCGCGTGTGACGCGTTTGGGAAGCCGGAATATTGCTGCAACGGAGCGTACGGTTCGCCGGCGACGTGCAAGCCGTCGGTGTACGCGCAGATGTTCAAATCGGCGTGTCCGAAATCGTATAGCTACGCCTACGATGATTCCACTAGTACTTTCACTTGTGCAGGAGCCGACTATACAATCACATTTTGTCCATCTTCTTCCCCAAGTTTGAAATCGGCGTCGATAGGAGTGGACGCAGCACCATCGGTAGAACAAGCAGCAATGGCTACGAGCTCATGGATTGCGAATTTGGCCACTGGAGATTCAACCAGATCTCTTCCTTTTGGATCTTCTCATTACTCTGCAATTTTtctcattctttcttttttcctcttCAATTAA 933 0.5348 MPLFSLHYSHQHSSEIIFAFLTFLLFQGVSVSGTTFTFVNKCDYTVWPGALGKPDLGTTGFQLSKASSRTFQAPTAWSGRFWARTDCKFDDSGRGSCATADCGSGGIDCGGAGATPPATLAEFTLGSAGAQDYYDVSLVDGYNLPMMVEAKGGSSGSCETTGCVADLNRRCPSELRTEGGDACKSACDAFGKPEYCCNGAYGSPATCKPSVYAQMFKSACPKSYSYAYDDSTSTFTCAGADYTITFCPSSSPSLKSASIGVDAAPSVEQAAMATSSWIANLATGDSTRSLPFGSSHYSAIFLILSFFLFN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1468 310 ProSitePatterns Thaumatin family signature. 93 109 IPR017949 -
Sto11g1468 310 CDD TLP-PA 35 247 - -
Sto11g1468 310 SMART tha2 36 248 IPR001938 -
Sto11g1468 310 PRINTS Pathogenesis-related protein signature 35 47 IPR001938 -
Sto11g1468 310 PRINTS Pathogenesis-related protein signature 59 68 IPR001938 -
Sto11g1468 310 PRINTS Pathogenesis-related protein signature 80 91 IPR001938 -
Sto11g1468 310 PRINTS Pathogenesis-related protein signature 132 148 IPR001938 -
Sto11g1468 310 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Sto11g1468 310 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 20 265 - -
Sto11g1468 310 PANTHER OS03G0233200 PROTEIN 20 265 IPR001938 -
Sto11g1468 310 SUPERFAMILY Osmotin, thaumatin-like protein 34 249 IPR037176 -
Sto11g1468 310 ProSiteProfiles Thaumatin family profile. 33 248 IPR001938 -
Sto11g1468 310 Gene3D Thaumatin 34 248 IPR037176 -
Sto11g1468 310 Pfam Thaumatin family 40 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1468 Sto-Chr11 13923567 13924695 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0129 5 756751 757598 Sto11g1468 11 13923567 13924695 ECH
Sto9g3707 9 35382876 35394827 Sto11g1468 11 13923567 13924695 ECH
Sto11g1468 11 13923567 13924695 Sto11g1468 11 13923567 13924695 ECH
Sto10g0080 10 607190 610284 Sto11g1468 11 13923567 13924695 ECH