Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0891 ATGAAGCTCGCGTTTTCCATAAAAAGAATCTTACATCATCCACCTCATAACCTTTCTCTTCAATGGAGGTCTCTCCACTATGCGCTTTACCAACACGCACCACCCATGGAACCATTGGACCTCACTCCCAACTTCAACTCCTTACACTCCATCTCCTCACACCcagctttctttcttttccaaatttGCCGAAGCGTCAATTCCCTCAAGAGACTCCACGCCTTGCTTCTCGTGCACGGCCTCACCCGCGACCTTTTCTGCGACACCAAGCTCGTCAGCCTCTACGGCTCTTTTGGGTGTCTTCACTCTGCTCGCAAGGTGTTCGATCGAATGCCAAGCCCGGATTTTTATTCTTGGAAGGTTATGCTCAGGTGGTACTTCTTGAACGACATGTATTCCGAGATCGTTCCCTTCTATTCCCGTATGAGGGTGTTTGTCCAAGGTTATGACGAGGTGGTTTTCTCTTTTGTCTTGAAAGCTGCTTGTGAGTTGCGTGATGTCGTTGAAGGTATGAAGCTGCATTGCCAAATTGTTAAAACCAACACTATGGGTAGTTTTGTGTTGGCGGGTCTTCTGGATATGTACTCTAAATGTGGGGAGGTTAAAAGTGCCCGCGATGTGTTCGATGAAATGTTTGATAGAAATGTAGTTTCTTGGAGTTCTATGATTTCAGCATATGTGCAGAATGACTGTGGGGAAGAAGCGTTGGCCTTATTCAATAGAATGAGAGAAGGGTTTATTGCAGGTAATCAATTTACTGTGGGAAGTTTAACCACAGCATGTACAAAGTTGGGATATCTACATCAAGGAAAATGGGTTCATGGCTATGTAATAAAAAATGGGATTGAAATCGGACATTTCTTGGCAACATCTCTCTTGGATATGTATGTCAAGTGTGGGGATATAAGAGACGCTCGTTCTGTTTTTGATGAGCTTTCAACTGCTGAACTTGTTTCCTGGACAGCAATGATAGTTGGGTATACTCAAAGAGGTCACCCGGAAAAGGCATTAGAGTTGTTCACAGATGAAAAATGGGCAGGTCTTATGCCCAATTCTCTTACCATTGCAAGTTTGCTTTCAGCTTGTGCACAACTGCGCAATACAACTATAGGAAGGTCACTTCATGTTCTAATACTTAAGCTTGGTTTGGATGATCCTACAGTGAGGAATGCTCTTGTGCACATGTATGCCAAGTGCAATATGATCGCTGATACTTGTGACATATTTAAAACTATCACTCACAAGAATGTAATATCTTGGAACTCAATTATTTCTGGTTATGCCCAAAGTGGTTCTGTGTACGAAGCTCTTGAGCTGTTTAAGTGCATGAGGCTAGCCTCATGTTCACCAGATGCAGTCACATTAGTCTGTGTTCTCTCAACATGTGCTTCCCTTGGTGCTCTTGAACTTGGTTCTTCTCTTCATGCCTTGTCTCTAAAGGATGGTTTAGTATCATCTAGCATCTATGTTGGCACAGCACTTCTGAACTTGTACGCAAAATGTGGGGATGCAAAATCAGCTCGTATGGTATTTGATGAGATGCGAAAAAAGAATACAGTCACATGGAGTGCCATGATGGGTGGCTATGGCATGCAAGGTGATGGCAATGGGTCTCTTTCACTCTTCAGGGATATGTTGAAGGAGAACTTGGAGCCCAATGAAGTGGTCTTCACAACTATATTAACAGCATGCAGCCATGCAGGGATGGTTGGAGAGGGCAGGAGGTTTTTTAATTTGATGTGTAAGGAGCTGAACTTTGTTCCTTCCATGAAGCATTACGCATGTATGGTTGATCTATTAGCACGTTCCGGCAACCTTGAAGAGGCATTGGAGTTTATTGAGAAAATGCCTGTCCAACCTAATGTTAGTGTTTATGGAGCTTTTCTCCATGGATGTGGACTTCATTCGAGGTTTGAATTAGGAGAAGTTGTACTGAGGAGAATGTTGGAGCTGCATCCTGATGAATCTTGCTACTATGTGCTAATGTCAAACTTATATGCTTCAGATGGGAGATGGAGTCAGGTTAAGCAGGTGAGAGAGTTGATGAAGCAAAAAGGATTGAACAAAGTCCCCGGATGCAGTGTAGTGCAGATGGATATCAACAATGACTTATATGACAAAGTTGCAGCTTTTGCCTAA 2139 0.4287 MKLAFSIKRILHHPPHNLSLQWRSLHYALYQHAPPMEPLDLTPNFNSLHSISSHPAFFLFQICRSVNSLKRLHALLLVHGLTRDLFCDTKLVSLYGSFGCLHSARKVFDRMPSPDFYSWKVMLRWYFLNDMYSEIVPFYSRMRVFVQGYDEVVFSFVLKAACELRDVVEGMKLHCQIVKTNTMGSFVLAGLLDMYSKCGEVKSARDVFDEMFDRNVVSWSSMISAYVQNDCGEEALALFNRMREGFIAGNQFTVGSLTTACTKLGYLHQGKWVHGYVIKNGIEIGHFLATSLLDMYVKCGDIRDARSVFDELSTAELVSWTAMIVGYTQRGHPEKALELFTDEKWAGLMPNSLTIASLLSACAQLRNTTIGRSLHVLILKLGLDDPTVRNALVHMYAKCNMIADTCDIFKTITHKNVISWNSIISGYAQSGSVYEALELFKCMRLASCSPDAVTLVCVLSTCASLGALELGSSLHALSLKDGLVSSSIYVGTALLNLYAKCGDAKSARMVFDEMRKKNTVTWSAMMGGYGMQGDGNGSLSLFRDMLKENLEPNEVVFTTILTACSHAGMVGEGRRFFNLMCKELNFVPSMKHYACMVDLLARSGNLEEALEFIEKMPVQPNVSVYGAFLHGCGLHSRFELGEVVLRRMLELHPDESCYYVLMSNLYASDGRWSQVKQVRELMKQKGLNKVPGCSVVQMDINNDLYDKVAAFA 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0891 712 Pfam PPR repeat 217 244 IPR002885 -
Sto11g0891 712 Pfam PPR repeat 290 312 IPR002885 -
Sto11g0891 712 Pfam PPR repeat 191 216 IPR002885 -
Sto11g0891 712 Pfam PPR repeat 593 616 IPR002885 -
Sto11g0891 712 Pfam PPR repeat 91 112 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 555 589 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 190 217 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 492 518 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 418 452 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 520 554 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 318 340 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 217 244 IPR002885 -
Sto11g0891 712 TIGRFAM PPR: pentatricopeptide repeat domain 593 616 IPR002885 -
Sto11g0891 712 PANTHER OS07G0578800 PROTEIN-RELATED 62 704 IPR045215 GO:0003723|GO:0009451
Sto11g0891 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 518 552 IPR002885 -
Sto11g0891 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 316 350 IPR002885 -
Sto11g0891 712 Pfam PPR repeat family 318 363 IPR002885 -
Sto11g0891 712 Pfam PPR repeat family 415 463 IPR002885 -
Sto11g0891 712 Pfam PPR repeat family 517 565 IPR002885 -
Sto11g0891 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 215 245 IPR002885 -
Sto11g0891 712 Pfam E motif 635 697 IPR046848 -
Sto11g0891 712 Gene3D Tetratricopeptide repeat domain 384 471 IPR011990 GO:0005515
Sto11g0891 712 Gene3D Tetratricopeptide repeat domain 271 370 IPR011990 GO:0005515
Sto11g0891 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Sto11g0891 712 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL 62 704 - -
Sto11g0891 712 Gene3D Tetratricopeptide repeat domain 492 702 IPR011990 GO:0005515
Sto11g0891 712 Gene3D Tetratricopeptide repeat domain 148 270 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0891 Sto-Chr11 9515949 9518087 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0891 11 9515949 9518087 Sto11g0891 11 9515949 9518087 ECH