Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0780 ATGATAAGAATTCAATTCAAATTGGATAAGTATGTATGGCAGCTGGCGAAGAAGGCTGCGCCTGCGCCCTTAAACTCTACTCAACAATTGGACAAGAATAGTCTGAAAACACTAAAAATTCCATTCCATTTCTCACCATCGTCTCACATTCTCTCGCTTCGCTTGGCTTCTGTATGCTTATTATCTTCCTTCACAAGCTTCAATTTCCTCTCTCCACACACTTCTCTCGCCTCCGCCCTAACATCAACCTCTTCAGCTCTCCTCGGAAATCACGCTCCTCCTCAGGTGAAAGCAGAACTTAATGAACTTTCAAACTATTCTCAGGGCTTGCTTTTGGAGGCAATTCATTTTGCTGGTCACCCTGTTCACTTGCATGAGTATTTCTGTTGTATGCAGTCTGACATAATTTCACTCTTGGTTTTAGCCCAAAGAACCCACTTCTCACATCATGGTAAGCTCTCCCTTCCCTCGAGGGAAGGATCATTCTCTTCATCTTTTGATGAATACTCAAACTTCTGTGAAAGATTGGACAGAAAGCAGTGGcatcattcatcatgttgtgGTTGTTGCAATTGTTGTGCACTCTCCACCTACAGAACTCCAGTGAAACCCAGTCCCCTATGTGGGTTGAGGCAATCCATTCTACTTCAATTTTCCGCTTCCAGAAGGTTGCTTTTGGGTGGTGGAGATGAGTATTTTTTCCAGCTACCAGCTTATGGTCTAAGCAGGGTTTGTTATGAGCTTAATTACTCTGTCAAGAAGAGAAATGGTTGCAATAAAAGTaggaggagaagagaaagatGTTTTAGTTTGCTTTCAGAGAAAGGGGGTGAAATTCACCATTCCTCTGGTGCTGATGATGCTGAAACGATTCTCAGCTTATTAACTGAAGATGTAGATGTGGATTTCATTGGTGTCAAAGGGAAGAACGTATCTTCTTTTAAGAGGTTGGAActggagaagaaaagaaaaaatggaaatagagagaaaattttgagtttgggtaaagaaataaaagtagagAAGCAAGGGAGTTTGAAGCACCATGATACATTCAATGAGGAGTTGCGAAAAGGGGATGAAATATCCAATGAAAGAAGGGAAGCCATTACAAAATGTGGAAACAATAGGAAACAAAGAAATATTTCTAATTGTTCATCATATTACTCGTTTTCTTCTTCACAAGATTTTGGGAGTGACCTGGAAGTTCAGGATAAGCATAGGCAACATTTGGAAGAATTACTACAAGGATATGAAAAGGATGAAGCACATTATATGGAGGGACAAGTAAAGGAAGAACTCAACAGGAGAAGTGATGGCTCAGAGAAGATGGAGGAAACTTTAAATGAAGAAAGAATTGCATTTGATCCATTTATTGACAGGAACCTAAGAAAAGAGTCTGAGAAGAAGCTGACTGAGGTAACAATGGAAGAAACAGAGTCCAGGAGATTACACCTGGGCATGCATTCGCAAGCATTTAGAACAAATGAATCCAGTTATGGAAAAGCCTCTTCTTTCCACAAGAAATTTGACAGTGAGGAATATAATTCAGCTTCCGTGAAGGATCTGGATATGAAAACTAGACAGGCAAATATTCAGAAAGAAAACAGAAGAAAGTATAAATCTACAGAAGTTCAAGAATGTGGTGGTGATGAACTTGAAACAACTTCGAAATCACAAAAGGCATTCAGTGGCAGGGGAGGAAACTTAGAAATATCAGAAAAACTGTCACTTAAAGCAGGTGACAATCATCAGAATATTGTTTGCTCTATCACAGGAAAGGATGAAGTAATTAAAAATTCcaagaaaaatattgaaaagtCCAAAATTCAAGACGCAGAAAGAACCTCAAATAGTAAGATGAGGAATTTGGGCGAGAACAAAGTTTCGATTCTCAGTTCAGTTCAGGGGATCGAGGAACAACACCaccaaaaagagaagaagatcaTTGCACAGgttgaagagagaagaaaatctCAACAATTTACAGAATTACAAGTCCAAAACAGTAATGTTGAAAATATCATAAACTCAAGCACTAGAATACAGAATTTTGAAGAGAATCTAAACTTCAGTTCAGATGCAAATGGGACATTCATCCAAACCGATCAAAAGATGACTCGAAGTATTCAACCCTACGAAGGATCTGGATTTGTCAACATCATATCAGAAAGCTATTCCGGTGATAAAAAACAAGGCTCAAGTTCTCAAAGAAATTCTGATAAGGTAAGGTTTAtccaaaagagtaaattaacatcAGTTATTGAAACTAGAGAGAGTCATTGCCAAACTGATGACAGAATTACACAGTTCTATTCAACTAGTGAGGCCCAAAGACCTAAGAACCTATCAATTACCATTGAAAATGCTTCAGAAAGGGCTTCCTGCTTCCAAGGATCTTTGAATATGGTTTCAGAGGCTAGAAAACATGTCATATTAGCAGAAGGTAATACAAGAAGTTCAGAGGTAATGTTGGCGCCTTGTTCATCTCAATTGGTTGTTAAAGGCTCATCGGATATGGAACCTACCACTGGAACTGCAAGCCCAGAGGTCTGCCCTGAAATCCCAGAAAGTGGTTTTTCTGCCTTGTATGATAATTCAAAAAAGAAAGGTCGAGTTTTGGTATATGAAATTGGATCTAGAGATAGGAGTGATCTAGCTTATAGTGAGCCTTCAAACATAATCTCCCCTGAAGATGCTCTGGGTTCGGCTGATTGCTTAGAGAAATCTTCCAAACTGTTTGTTGAGAAGGTCAGGCATGATGCTGCTCCTTCTGAAGCACAAGAGACAGATGTTACTGGAACCAATTTGGCCTCTAAAAATGAGATGAATCAGCTCTACAGTTTAAGGAAACATGGAACTCAAAATGGCTCTCAGTTCAAGGAGCATGGTTCTAGTTGTTCCTCTGGGTTTTCTGGGACCAAGGGACCTTCTGATGAGACGAGAGATGTAACAGAACTATCTGTTAAACCAAGTCCAATAGCTGAAGATCCGGAGATCAGTAAGGAAACTGGAAAACCCATTGTTAAGAGAACTGGCAGGTTCCTATGGAATATTGTTGCAGATGTTGTTCGACTACGATGGGCTTCACAACCTGCTACCTCCAATTCAGCTGCAAGATCAGTTGAAAGAAGCTCATCAAAAAAGTCTGATGACGAGACATGGTCTTCTAGACAGGGGCAGGAGGAAACCATTAAAAGCAATGTAATGATGGAAAGAATAAGTGATCAACCTCAAGCCACAACTTCTATTaagctaaacccaaaaaatcATGATATCGTCAGTGAGAGACAGGTGTCTGATACAAAGAAATCAAAGGACAAAGTAAAGCTTTTTGAGTTTGGTTCGTCATCTACAAGTACATTGGAAAGTGGATCAACTTCAGTAGATGGCTTGTTTGCTTCTGGAGAGGGAAACACCAATTGGACTGGAGACAGAAAAGATATGCAAGTCACTCCCTTGGGGGTAGAAAACTTGGAAATATCCATTCCATTATCTGCCGAAGGACCTTCTTTTGACAAAGAAGTTGTAAATGCTGATATATCTGATGTGCCTAGAACAGAGTCTTTGGAAGAACCTGAAACTGCTACACAGACTGGATTCAGTGGTACTGGGGGAAATGATGGAGAGTGGAAGCAAAAGAGGGTTCAACGAAAGAAGCAAGTATCAAGAGATAGGTTTGAGAAGTTGGAAGAAGCCTATATTCTTGAATTTGAGCAGCGAAGATTGGATGAAATGTTCATGAGGGAAGCACTCTTGGAAGCTCAGAAAGCTGCTGATAATTGGGAGGTACCAATTGGTGCTGTACTTGTACAACATGGGAAAATTATTGCACGGGGATGCAACTTAGTAGAACAGTTACGGGACTCCACTGCCCACGCTGAGATCCTTTGTATACGAGAAGCTTCAAATCTTCTTCAAACTTGGAGACTTGCATTTAGACCAGTCCCCTTACTGGAGGACGTGAAAGCACTATCAGATAAGGAAACTACACTTTATGTCACACTTGAACCCTGTCCAATGTGTGCTGGTGCCATTCTTCAGGCGAGGATAGATACTCTTGTATGGGGAGCTCCTAATAAACTTATTGGAGCTGATGGTAGCTGGGTCAGACTTTTTCCTGATGGAGGAAATGGGTTGGAATTAGAAGAAAATCCAGGAGGGGGCCCAGTTCATCCATTGCATCCAAAGATGAAGGTAAGGCGTGGTGTGTTGGAGTCACAGTGCGCTAATGTAATGCAGCAATCGTTCCAGCtgaggaggaagatgaagaaggaagaagcagcAACACCACCATCCAAACCTTCACGCTTCCCTTTTACTCGTCGTTCACCCAAGTTCTTAAACAAGATGCATGGCATCTTCCACATGATCGGTTTCTAA 4383 0.3879 MIRIQFKLDKYVWQLAKKAAPAPLNSTQQLDKNSLKTLKIPFHFSPSSHILSLRLASVCLLSSFTSFNFLSPHTSLASALTSTSSALLGNHAPPQVKAELNELSNYSQGLLLEAIHFAGHPVHLHEYFCCMQSDIISLLVLAQRTHFSHHGKLSLPSREGSFSSSFDEYSNFCERLDRKQWHHSSCCGCCNCCALSTYRTPVKPSPLCGLRQSILLQFSASRRLLLGGGDEYFFQLPAYGLSRVCYELNYSVKKRNGCNKSRRRRERCFSLLSEKGGEIHHSSGADDAETILSLLTEDVDVDFIGVKGKNVSSFKRLELEKKRKNGNREKILSLGKEIKVEKQGSLKHHDTFNEELRKGDEISNERREAITKCGNNRKQRNISNCSSYYSFSSSQDFGSDLEVQDKHRQHLEELLQGYEKDEAHYMEGQVKEELNRRSDGSEKMEETLNEERIAFDPFIDRNLRKESEKKLTEVTMEETESRRLHLGMHSQAFRTNESSYGKASSFHKKFDSEEYNSASVKDLDMKTRQANIQKENRRKYKSTEVQECGGDELETTSKSQKAFSGRGGNLEISEKLSLKAGDNHQNIVCSITGKDEVIKNSKKNIEKSKIQDAERTSNSKMRNLGENKVSILSSVQGIEEQHHQKEKKIIAQVEERRKSQQFTELQVQNSNVENIINSSTRIQNFEENLNFSSDANGTFIQTDQKMTRSIQPYEGSGFVNIISESYSGDKKQGSSSQRNSDKVRFIQKSKLTSVIETRESHCQTDDRITQFYSTSEAQRPKNLSITIENASERASCFQGSLNMVSEARKHVILAEGNTRSSEVMLAPCSSQLVVKGSSDMEPTTGTASPEVCPEIPESGFSALYDNSKKKGRVLVYEIGSRDRSDLAYSEPSNIISPEDALGSADCLEKSSKLFVEKVRHDAAPSEAQETDVTGTNLASKNEMNQLYSLRKHGTQNGSQFKEHGSSCSSGFSGTKGPSDETRDVTELSVKPSPIAEDPEISKETGKPIVKRTGRFLWNIVADVVRLRWASQPATSNSAARSVERSSSKKSDDETWSSRQGQEETIKSNVMMERISDQPQATTSIKLNPKNHDIVSERQVSDTKKSKDKVKLFEFGSSSTSTLESGSTSVDGLFASGEGNTNWTGDRKDMQVTPLGVENLEISIPLSAEGPSFDKEVVNADISDVPRTESLEEPETATQTGFSGTGGNDGEWKQKRVQRKKQVSRDRFEKLEEAYILEFEQRRLDEMFMREALLEAQKAADNWEVPIGAVLVQHGKIIARGCNLVEQLRDSTAHAEILCIREASNLLQTWRLAFRPVPLLEDVKALSDKETTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLIGADGSWVRLFPDGGNGLELEENPGGGPVHPLHPKMKVRRGVLESQCANVMQQSFQLRRKMKKEEAATPPSKPSRFPFTRRSPKFLNKMHGIFHMIGF 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0780 1460 Coils Coil 431 451 - -
Sto11g0780 1460 SUPERFAMILY Cytidine deaminase-like 1240 1425 IPR016193 GO:0003824
Sto11g0780 1460 MobiDBLite consensus disorder prediction 954 978 - -
Sto11g0780 1460 MobiDBLite consensus disorder prediction 954 1005 - -
Sto11g0780 1460 Gene3D Cytidine Deaminase, domain 2 1232 1433 - -
Sto11g0780 1460 MobiDBLite consensus disorder prediction 1191 1206 - -
Sto11g0780 1460 MobiDBLite consensus disorder prediction 1044 1059 - -
Sto11g0780 1460 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 991 1451 - -
Sto11g0780 1460 Coils Coil 1213 1233 - -
Sto11g0780 1460 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 991 1451 - -
Sto11g0780 1460 MobiDBLite consensus disorder prediction 1421 1442 - -
Sto11g0780 1460 Hamap tRNA-specific adenosine deaminase [tadA]. 1248 1421 IPR028883 GO:0002100|GO:0008251
Sto11g0780 1460 MobiDBLite consensus disorder prediction 1185 1217 - -
Sto11g0780 1460 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 1243 1357 IPR002125 -
Sto11g0780 1460 MobiDBLite consensus disorder prediction 1031 1071 - -
Sto11g0780 1460 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1242 1380 IPR002125 -
Sto11g0780 1460 CDD nucleoside_deaminase 1248 1368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0780 Sto-Chr11 8698969 8705745 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0780 11 8698969 8705745 Sto11g0780 11 8698969 8705745 ECH