Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0775 ATGATGCCCCCTGACCAAGAAACCACGGTTCATCATGTCACGCCAAATATTCCGGCCACCGTGAACCGGATGCCCGAGGACAGCTCCGTCCATGCCGAACCGCCCGATTCCGCCGCTCATGACGTCAAACCCGGCTTTGATAGTGGCATTGATATGAATATTATTCAACATCACCACCCAACAACACTACCTCCAAGGCTTTCCATTCTTCACAAATCCCTGCGTCCCGTTACCCTTCAGTTTGAGGACGTTTCTTATAGTGTAACCATTGGAAGCAAAAAGAATTATTGTGGTTGCATTCCTTCACAAGATCCGAAACCGGACCGGAAGATCCTCAACGGCGTGACGGGCCTGGTCCGGCCCGGCGAGCTTCTCGCAATGCTGGGCCCATCGGGCAGCGGCAAGACCACGCTTCTCACGGCCCTCGGCGGCCGCCTCGCCGGAAAAGTCTCCGGCAACATAACCTACAATGGCCGTCCTTTCTCCGGCTCCATCAAGCGAAACACGGGTTTCGTCTCACAGGACGACGTCTTATACCCTCACCTCACCGTCCTTGAGACGCTCCTCTATACCGCTTTCTTACGCCTCCCCAAAAGCCTcacaagagaagagaaaatggaGCAGGCTGAGATGGTTGTGGCGGATCTCGGGTTGACCCGGTGCCGGAACACCGCCGTGGGCGGCGCCTCCGCCTTGTTCCGGGGGATCTCCGGCGGGGAGAGGAAGCGGGTCAGTATCGGGCAGGAGATGTTGGTGAACCCGAGCCTGTTGTTGCTGGATGAACCCACGTCTGGGCTGGACTCCACGTCGGCCCAACGCATCGTGGCCGTGCTAAGGGGGCTCGCGCGGGGCGGCCGGACCGTGGTGACGACGATTCATCAGCCGTCGAGCCGGTTGTACTGGATGTTCGATAAGGTTGTGGTATTGTCGGACGGGTGCCCGATTTACTGCGGGCAGGCGGGTCGGGTCATGGAGTATCTTGAATCCATTGGTTATGTGCCCACTTTCAACTTCATGAACCCGGCTGATTTTCTGCTTGATCTTGCTAATGGCATAGTTGGTGATGTTAAACAGGAAGATCAGACAGAAATGCATGGAAGATTAGACCACATTGAAGATCAATCTTCAATCAAACAGTCCCTAGTTTCATCCTATAGAAAGATTTTATATCCTGCTCTGAAAGAAGAGATTCAGCACAATAATAGAAATCCTGCTGCTTTCACATCAGGAGCACCCagaaGCTCACAGAATCAGTGGAACACCAGCTGGTGGGAGCAGTTCAAGGTTCTGCTTAAGAGGGGTTTAAAAGAGAGGAGACATGAATCTTATTCAGGCCTCAAGATTTTCCAAGTCTTGTCTGTATCATTTCTCTCAGGACTTCTTTGGTGGCATTCTGATCCCTCAAACATACAAGATCAGGTAGGCctgcttttcttcttctccatcttcTGGGGATTCTTCCCTCTATTCAATGCCATCTTTGCATTCCCTCTGGAGAGGCCAATGCTAACAAAAGAAAGATCTTCAGGAATGTACCATCTCTCCTCCTACTACATAGCCAGAATGGTAGGTGACCTACCCATGGAGCTTGTCCTTCCCACAATCTTTATAACCATCACCTACTGGATGGGTGGCCTCAAGCCTTCACTAATCACCTTTGTGTTAACCCTCTTGATCATCATCTTCAATGTGCTAGTCTCCCAAGGAGTTGGCCTAGCACTTGGTGCCATCTTAATGGAAGTGAAGCAAGCCACAACCTTAGCTTCAGTGACCATGCTGGTGTTTCTCATAGCTGGTGGCTACTACATTCAGAAGATGCCATCCTTCATTGCTTGGCTGAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTTCTGGTGGGAGTCCAATATTCAGAAGATGAGGTTTATGAGTGTGGATTGGGGGGGTTGCACTGTAGGGTGATAGATTTTCCTGCAATAAAGTGTCTGGGTGATATTGGTGATTTGTGGGGTGATGTGGCTGCATTGGCTGTGATGTTGATTGGATACAGAATTGTGGCTTATGTGGCTTTGAGAATTGGACAGCCTCACTGA 2076 0.4981 MMPPDQETTVHHVTPNIPATVNRMPEDSSVHAEPPDSAAHDVKPGFDSGIDMNIIQHHHPTTLPPRLSILHKSLRPVTLQFEDVSYSVTIGSKKNYCGCIPSQDPKPDRKILNGVTGLVRPGELLAMLGPSGSGKTTLLTALGGRLAGKVSGNITYNGRPFSGSIKRNTGFVSQDDVLYPHLTVLETLLYTAFLRLPKSLTREEKMEQAEMVVADLGLTRCRNTAVGGASALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTSAQRIVAVLRGLARGGRTVVTTIHQPSSRLYWMFDKVVVLSDGCPIYCGQAGRVMEYLESIGYVPTFNFMNPADFLLDLANGIVGDVKQEDQTEMHGRLDHIEDQSSIKQSLVSSYRKILYPALKEEIQHNNRNPAAFTSGAPRSSQNQWNTSWWEQFKVLLKRGLKERRHESYSGLKIFQVLSVSFLSGLLWWHSDPSNIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLTKERSSGMYHLSSYYIARMVGDLPMELVLPTIFITITYWMGGLKPSLITFVLTLLIIIFNVLVSQGVGLALGAILMEVKQATTLASVTMLVFLIAGGYYIQKMPSFIAWLKYISFSHYCYKLLVGVQYSEDEVYECGLGGLHCRVIDFPAIKCLGDIGDLWGDVAALAVMLIGYRIVAYVALRIGQPH 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0775 691 Gene3D - 93 331 IPR027417 -
Sto11g0775 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 330 IPR027417 -
Sto11g0775 691 Pfam ABC-2 type transporter 425 631 IPR013525 GO:0016020|GO:0140359
Sto11g0775 691 ProSitePatterns ABC transporters family signature. 236 250 IPR017871 GO:0005524
Sto11g0775 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 47 688 - -
Sto11g0775 691 SMART AAA_5 121 313 IPR003593 -
Sto11g0775 691 MobiDBLite consensus disorder prediction 1 42 - -
Sto11g0775 691 Pfam ABC transporter 112 264 IPR003439 GO:0005524
Sto11g0775 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 688 - -
Sto11g0775 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 336 IPR003439 GO:0005524
Sto11g0775 691 Pfam ABC-2 type transporter 293 360 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0775 Sto-Chr11 8666576 8671476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0775 106 312 Calmodulin-binding Proteins AT2G36910 31.797 4.82e-14 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0775 11 8666576 8671476 Sto11g0775 11 8666576 8671476 ECH