Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0766 ATGGCGTCAGAGAGCGCGTCTCGATCGAGTTCACCGGCCGATTCGTATGTTGGTAGCTTGATAAGCTTGACCTCGAAGAGTGAGATCAGATATGAAGGCATTCTATACAATATTAACACCGACGAGTCCAGTATTGGTCTCAGAAACGTACGATCATTTGGAACAGAAGGGAGAAAAAAGGATGGTCCGCAAATTCCTCCTGGTGACAAGGTGTATGAGTATATACTGTTTCGTGGGAGTGATATCAAGGATTTACAGGTTAAATCTTCTCCACCTGTACAGCCTACTCCACCTATCAACAATGACCCGGCTATTATTCAGTCTCACTATCCCCGCCCTGTCACTACATCTGCGAGTCTACCTTCTGCTGTAAGTGGGCCTTTGACTGATCATGGTTCCCATACAACACAGCTTGGAATCCCTGGGTCAAATTTTCAAGGGCCCGTACCTTTGTATCAACCTGGAGGGAACATGGGTTCATGGGGAGCTTCACCACCTGCCCCTAATGCAAATGGTGGTGGTCTTGCGATGCCAATGTATTGGCAAGGATATTATGGTGCCCCAAATGGGATTCCTCATATAGCCCAGCAATCTTTGCTTCGACCACCTCCAGGCTTATCAATGCCTTCTTCTATGCAGCAGCCAATGCAGTATCCCAATTTTAATCCCTCTCTATCCACTGGAGCTTCAACTTTGCCTGAACTACCACCATCTTTGCTCCCTGGAAGTTCTAGTTCCCGTACCGTAACATCTACTTCTTTACCACCACCAAATCTGGCATCAACTTTGCCTCCAGTACCTGCCACTACATTGGCTTCTGAAACTTTGCCAGCATCAGTACCAAACAAAGCACCTTCTGTTTCGCATGCTGCAGCCACAACTGCAGCTAACTTGCCATCACCGACTCCTTTGGTCGCTTCTAGTCCAGATGTAAATGCAACAGTGCCACCAATCTCCAATAAAACTAGTGCGATTTCAGGTTCAAGCTTGCCATATCAAACTGTATCCCAATTGACGCCAGCACTTGTTGGGTCAACTAGTTCTGTCCGTACAGAAACACCAGCCCCTTCTCTGGTCACACCAGGCCAATTTTTACAGCCTGGACCGACCATAATTTCTTCGTCGCAGCCTTCTCAAACCCCTCATAAGGATGTTGAAGTGGTTCAGGTATCATCAACATCATCTCCACATCTTTCTGTGCCAGTTTCTGCTGAAACTCAACCCCCTATACTGCCATTGCCAGCAACATCACGGGCCAATCACAGGCCTAGTGGAGGTCCTGCCAGAAGTTATCAAAACAATTATAGTTACAGGGGTcatggaagaggaagaggaactGGGGGTACACGGCCAGTCACAAAATTTACTGAAGATTTTGATTTCATGGCAATGAATGAGAAATTCAACAAGGATGAAGTATGGGGTCATCTTGGTAAAAGCAACAAGTccaattcaaaagaaaaagacGGGGAAGAAAATGTTAGTGATGAAGATGATATTCATGATGATTACAATGGTGAAGAATCAAAATTAGAGCCCGTCTACAATAAGGATGATTTTTTCGACTCACTCTCTTGCAATGCGCTTGATCGTGATTCACAGAATGGAAGGACTAGATATTCTGAACAGATTAAGATTGATACTGAGACATTTGGTGATTTTGTGAGGCCTCGAGGTGGTCGAGGTGGCCGTGGTCCTTGGCGCGGTAGTCGCTCTCGGGGTGGTTATTATGGAAGAGGATATGGGTATACGGCGAGGGGAAGAGGTCGCGGCAGCATGTCTGGTCGTTCTTAG 1794 0.4548 MASESASRSSSPADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLRNVRSFGTEGRKKDGPQIPPGDKVYEYILFRGSDIKDLQVKSSPPVQPTPPINNDPAIIQSHYPRPVTTSASLPSAVSGPLTDHGSHTTQLGIPGSNFQGPVPLYQPGGNMGSWGASPPAPNANGGGLAMPMYWQGYYGAPNGIPHIAQQSLLRPPPGLSMPSSMQQPMQYPNFNPSLSTGASTLPELPPSLLPGSSSSRTVTSTSLPPPNLASTLPPVPATTLASETLPASVPNKAPSVSHAAATTAANLPSPTPLVASSPDVNATVPPISNKTSAISGSSLPYQTVSQLTPALVGSTSSVRTETPAPSLVTPGQFLQPGPTIISSSQPSQTPHKDVEVVQVSSTSSPHLSVPVSAETQPPILPLPATSRANHRPSGGPARSYQNNYSYRGHGRGRGTGGTRPVTKFTEDFDFMAMNEKFNKDEVWGHLGKSNKSNSKEKDGEENVSDEDDIHDDYNGEESKLEPVYNKDDFFDSLSCNALDRDSQNGRTRYSEQIKIDTETFGDFVRPRGGRGGRGPWRGSRSRGGYYGRGYGYTARGRGRGSMSGRS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0766 597 CDD LSm14_N 16 87 IPR025609 -
Sto11g0766 597 MobiDBLite consensus disorder prediction 475 509 - -
Sto11g0766 597 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Sto11g0766 597 SMART FDF_2 453 555 IPR019050 -
Sto11g0766 597 ProSiteProfiles TFG box profile. 535 555 IPR025768 -
Sto11g0766 597 PANTHER PROTEIN DECAPPING 5-LIKE 5 590 - -
Sto11g0766 597 MobiDBLite consensus disorder prediction 115 143 - -
Sto11g0766 597 Pfam FDF domain 454 552 IPR019050 -
Sto11g0766 597 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Sto11g0766 597 MobiDBLite consensus disorder prediction 347 380 - -
Sto11g0766 597 SMART LSM14_2 10 110 IPR025609 -
Sto11g0766 597 Gene3D - 7 92 - -
Sto11g0766 597 PANTHER SCD6 PROTEIN-RELATED 5 590 - -
Sto11g0766 597 ProSiteProfiles FFD box profile. 513 528 IPR025761 -
Sto11g0766 597 MobiDBLite consensus disorder prediction 201 267 - -
Sto11g0766 597 MobiDBLite consensus disorder prediction 210 257 - -
Sto11g0766 597 ProSiteProfiles DFDF domain profile. 447 483 IPR025762 -
Sto11g0766 597 MobiDBLite consensus disorder prediction 551 597 - -
Sto11g0766 597 MobiDBLite consensus disorder prediction 115 152 - -
Sto11g0766 597 MobiDBLite consensus disorder prediction 475 491 - -
Sto11g0766 597 MobiDBLite consensus disorder prediction 394 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0766 Sto-Chr11 8583083 8587511 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0766 11 8583083 8587511 Sto11g0766 11 8583083 8587511 ECH