Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0749 ATGCAGCAACACCACCACCACAACTCTATGTTTCCAGAACTTTCTCATCATCAATACCCACTCCTCCAGCCCTGGCCCATGGGCCCGGCGGTCCACTCCTTCGGCCCGGGGGCCCGAGACCACGACCCCTTCCTACCCCCTCCTCCGCCCCCGCCCTACGCCGCTCTATTCAACCGGAGGGTCCCTTCCCTGCAGTTCGCCTACGACGTGGGCTCGACGTCCTCCGACCACCTCCGGATCCTGTCCGACGCGCTCGGGCCCGTGGTCCAGCCCGGCCCGGGCCCGTTCGGGCTTCAGGCGGAGCTGGGGAAGATGACGGCCCAGGAGATCATGGACGCGAAGGCCCTAGCGGCGTCCAAGAGTCACAGTGAAGCGGAGAGGAGACGCAGGGAGAGGATCAATAACCATCTTGCTAAGCTTCGTAGCTTATTGCCCAGTACAACCAAAACGGACAAAGCGTCGCTACTAGCAGAAGTGATACAGCACGTGAAGGAGCTGAAGAGGCAGACGTCGGTGATAGCGGAGACGAGCGCGGTGCCGACGGAGGGGGACGAGCTGACGGTGGACGGAGGGGCGGACGAGGGAGGGAGGTTCGTGATAAAGGCGTCGTTCTGCTGCGAGGACCGGTCGGATCTGCTGCCGGAGCTCATCAAGACGCTCAAGTCCTTGAGGCTGAAGACGCTCAAGGCGGAGATCACCACGCTGGGAGGGCGCGTGAAGAACGTCCTCTTCATCACAGGGGAAGATCAAGACCAAGACCAAGATAATCAAGAttattataacaataataataattcatctTGCTGCTGCAGTAGTAATGGGATCATGGATGGGCATgaccatcatcatcatgatcatGATCATCATCATGAGCATCATGATCATAGCCAGTATTGTATAAACTCAATACAAGAAGCTCTTAGGGCTGTGATGGATAAGAAtggtggaggaggaggtggtggtggtggggatgagTCTGCCAGTGGGAGTGTTAAGAGACAAAGGACTAATCTTAGTATCCTCCAACAACACAGTTCAGAGATCGAGAGACAAGAGACAAGGGATGTGACTAATTGTACGAGTTAA 1086 0.5285 MQQHHHHNSMFPELSHHQYPLLQPWPMGPAVHSFGPGARDHDPFLPPPPPPPYAALFNRRVPSLQFAYDVGSTSSDHLRILSDALGPVVQPGPGPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSVIAETSAVPTEGDELTVDGGADEGGRFVIKASFCCEDRSDLLPELIKTLKSLRLKTLKAEITTLGGRVKNVLFITGEDQDQDQDNQDYYNNNNNSSCCCSSNGIMDGHDHHHHDHDHHHEHHDHSQYCINSIQEALRAVMDKNGGGGGGGGGDESASGSVKRQRTNLSILQQHSSEIERQETRDVTNCTS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0749 361 MobiDBLite consensus disorder prediction 329 346 - -
Sto11g0749 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
Sto11g0749 361 Gene3D - 111 176 IPR036638 GO:0046983
Sto11g0749 361 PANTHER TRANSCRIPTION FACTOR BHLH30 33 342 - -
Sto11g0749 361 SMART finulus 123 172 IPR011598 GO:0046983
Sto11g0749 361 Pfam Helix-loop-helix DNA-binding domain 120 166 IPR011598 GO:0046983
Sto11g0749 361 PANTHER TRANSCRIPTION FACTOR BHLH30 33 342 IPR045847 GO:0003700|GO:0006355
Sto11g0749 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 173 IPR036638 GO:0046983
Sto11g0749 361 CDD bHLH_AtAIG1_like 112 189 - -
Sto11g0749 361 MobiDBLite consensus disorder prediction 311 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0749 Sto-Chr11 8437038 8439384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0749 53 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 58.252 1.27e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto11g0749 HLH 1.8e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0749 11 8437038 8439384 Sto11g0749 11 8437038 8439384 ECH