Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0724 ATGGAAACATCATTTGCTGTTGTGAAACCTCAAGAAAATGGGAATGCTACTATTGCAAAGATCTCTGGTGCTGGGGGGCTGGGAGAGGGTACTCCAAAGAGTGAGAGAGAGGATGACAAGTTTTGTGATGATATATTTGGTGAAACACCAATTGGAGTTCGGAAATTGAGCGTAGAAGATGGTTTACAGATTGAGAGGGATGATCTACATGACAATTGGGACGACGCAGAGGGGTATTACAACTATCGTTTTGGTGAAATACTTGATGGACGATATAAAGTCACTGCTGCTCATGGGCGAGGTGTCTTTTCAACTGTTGTTCAAGCAAAGAATATCAAGGCTGCTAATAGTGAGCCAGAAGAAGTAGCTGTAAAAATTGTTCGTAATAATGACACTATGTACAAGGCTGGTGTGGATGAGTTGGTCATATTAAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTcgttttttttcaagttttaaGTACAGGAACCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCTGTGAGAGCGTACGCAAAACAACTTTTTATTGCACTTAAGCATCTTCGGAACTGTGGTGTCCTCCATTGTGATATAAAGCCAGATAATATGTTGGTGAATGAGGCAAAAAATGTGTTGAAGCTTTGCGATTTTGGTAATGCCATGTTTGCTGGTATGAATGAAGTTACACCATACCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATAATACTTGGCTTGCCATATGATCATCCATTGGATATGTGGTCTGTAGGTTGTTGTTTGTATGAACTCCATGCAGGGAAAGTTCTATTTCCAGGTCGTACAAACAATGATATGCTGCGGCTTCACATGGAATTGAAGGGCCCTTTCCCCAAGAAGATGCTCCGTAGGGGTGCATTTATTGAACAACATTTTGACCAGGAACTGAATTTTCTTGCTACAGAAGAAGATCCAGTAACAAAAAAGACTTTAAAGAGAATAATTCTCAACGTAAAACCAAGAGATATTGGAGCAATCATCACTGGCTCTCCTGGAGAGGATCCAAAGATGCTAAGCAACTTTAAGGACCTTTTGGAAAAGGTTTTCGTTTTGGATCCAGACAAGAGGTTGACAGTTTCTCAAGCATTGAGCCACCCATTCATCACTGGCAAATGA 1233 0.4015 METSFAVVKPQENGNATIAKISGAGGLGEGTPKSEREDDKFCDDIFGETPIGVRKLSVEDGLQIERDDLHDNWDDAEGYYNYRFGEILDGRYKVTAAHGRGVFSTVVQAKNIKAANSEPEEVAVKIVRNNDTMYKAGVDELVILKKLVGADPDDKRHCVRFFSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGMNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELHAGKVLFPGRTNNDMLRLHMELKGPFPKKMLRRGAFIEQHFDQELNFLATEEDPVTKKTLKRIILNVKPRDIGAIITGSPGEDPKMLSNFKDLLEKVFVLDPDKRLTVSQALSHPFITGK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0724 410 Gene3D Transferase(Phosphotransferase) domain 1 152 408 - -
Sto11g0724 410 Pfam Protein kinase domain 96 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0724 410 ProSiteProfiles Protein kinase domain profile. 92 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0724 410 Gene3D Phosphorylase Kinase; domain 1 62 151 - -
Sto11g0724 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Sto11g0724 410 SUPERFAMILY Protein kinase-like (PK-like) 79 409 IPR011009 -
Sto11g0724 410 SMART serkin_6 92 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0724 410 CDD STKc_PRP4 91 407 IPR044092 GO:0004674|GO:0006468|GO:0045292
Sto11g0724 410 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 410 - -
Sto11g0724 410 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0724 Sto-Chr11 8253781 8256603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0724 99 408 MAP Kinase Gene Family AT4G01370 31.746 1.20e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Sto11g0724 Pkinase 2.4e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0724 11 8253781 8256603 Sto11g0724 11 8253781 8256603 ECH