Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0722 AtgaattctctctttctttccaatACTATCTCTCCCCATTCTTCTACCACCATTaattccttctcctcctctgttTCCACCTCCCTCCCATGGCGGAGATTCACCGCATTTCCTTCCACGCATCGCCGGAGATCCTTCTCCGTTCAATCCAAGGTTAGGGAAATCTTCATGCCTGCCCTCAGCTCCACCATGACCGAGGGCAAGATCGTGTCCTGGCTCAAATCCGAGGGTGAAGTTCTCTCCAAGGGCGAAAGCGTCGTCGTCGTCGAGTCCGATAAGGCCGATATGGATGTCGAGACTTTCTACGACGGAATCCTCGCCGCTATTGTAGTTGCCGAGGGTGAAACCGCTCCCGTCGGTGCTCCTATTGGATTATTGGCGGAGACCGAGGAGGAAGTCGCTGAAGCCAAAGCTAAAGCGGCCAAATCCGCGTCGTCCTCGGCTTCGACTCCTCCAGCCGATACTTCAACATCCACTCCGGCGATTTCACAGCCACCTCCGCCGCCAGCTACGGTGGTTTCTGATGATGGTCCTAGGAAGACTGTGGCGACTCCTTATGCGAAGAAGCTAGCGAAGCAGCACAAAGTAGATATTGGATCGGTGGTTGGGAGTGGTCCGAATGGGAGAGTCACTCCTGCTGATGTGGAGGCGGCTGCTGGAATCGCGCCTTCTAAGAGTAATGTAGCTTCGTCGGCGGTGGCTGCAATTCCGGCAAAAGCAGAAGCTCCGACGGCTTCTTCTCCGCCTCCAATTGCAGGTTCTACAGTCGTTCCCTTCACAACAATGCAATCCGCGGTTTCGAAGAATATGGTGGATAGTCTCTCTGTGCCTACATTTCGTGTTGGGTATCCCGTGGCCACTGGTGCACTTGATGCTCTATATGAGAGGGTGAAACCAAAGGGCGTGACTATGACTGCCATTTTAGCGAAGGCCACTGCAATGGCACTGGTTCAGCATCCAGTAGTAAATGCCAGCTGTAAAGATGGGAAGAACTTCACCTATAACAGTAACATAAACATTGCTGTTGCTGTGGCAATCAATGGTGGTTTAATAACACCGGTTCTTCAAAATGCAGATAAGTTAGATTTATATCTGTTGTCCCAAAAATGGAAAGAGCTTGTGGAAAAAGCTCGTGCCAAGCAATTGCAACCGCATGAGTATAATTCAGGAACTTTCACGCTTTCCAATTTGGGTATGTTTGGAGTTGACAGGTTTGACGCCATACTTCCTCCAGGCCAGGGCGCTATTATGGCTGTTGGAGCATCAAAGCCTACTGTTCTGGCTAATGCAGATGGATTCTTCAgtgtgaaaaataaaatgctGGTGAATGTAACAGCTGATCACCGAATAATCTATGGAGCTGATTTGGCTGCATTCCTTCAGACATTCTCAAAAATCATTGAAAACCCAGAAAGCCTAACATTGTAG 1428 0.4797 MNSLFLSNTISPHSSTTINSFSSSVSTSLPWRRFTAFPSTHRRRSFSVQSKVREIFMPALSSTMTEGKIVSWLKSEGEVLSKGESVVVVESDKADMDVETFYDGILAAIVVAEGETAPVGAPIGLLAETEEEVAEAKAKAAKSASSSASTPPADTSTSTPAISQPPPPPATVVSDDGPRKTVATPYAKKLAKQHKVDIGSVVGSGPNGRVTPADVEAAAGIAPSKSNVASSAVAAIPAKAEAPTASSPPPIAGSTVVPFTTMQSAVSKNMVDSLSVPTFRVGYPVATGALDALYERVKPKGVTMTAILAKATAMALVQHPVVNASCKDGKNFTYNSNINIAVAVAINGGLITPVLQNADKLDLYLLSQKWKELVEKARAKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLANADGFFSVKNKMLVNVTADHRIIYGADLAAFLQTFSKIIENPESLTL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0722 475 Pfam Biotin-requiring enzyme 54 124 IPR000089 -
Sto11g0722 475 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 14 475 - -
Sto11g0722 475 Coils Coil 126 146 - -
Sto11g0722 475 Gene3D - 178 220 IPR036625 GO:0016746
Sto11g0722 475 Pfam e3 binding domain 182 216 IPR004167 GO:0016746
Sto11g0722 475 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 14 475 IPR045257 GO:0006086|GO:0045254
Sto11g0722 475 MobiDBLite consensus disorder prediction 142 160 - -
Sto11g0722 475 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 176 219 IPR036625 GO:0016746
Sto11g0722 475 MobiDBLite consensus disorder prediction 136 180 - -
Sto11g0722 475 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 77 106 IPR003016 -
Sto11g0722 475 SUPERFAMILY CoA-dependent acyltransferases 243 473 - -
Sto11g0722 475 ProSiteProfiles Biotinyl/lipoyl domain profile. 52 130 IPR000089 -
Sto11g0722 475 CDD lipoyl_domain 54 126 - -
Sto11g0722 475 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 182 219 IPR004167 GO:0016746
Sto11g0722 475 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 254 474 IPR001078 GO:0016746
Sto11g0722 475 Gene3D - 47 151 - -
Sto11g0722 475 Gene3D - 236 474 IPR023213 -
Sto11g0722 475 SUPERFAMILY Single hybrid motif 52 145 IPR011053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0722 Sto-Chr11 8241473 8244108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0722 20 475 Acyl Lipid Metabolism Gene Families AT3G25860 75.599 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0722 11 8241473 8244108 Sto11g0722 11 8241473 8244108 ECH