Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0710 atgcCTCCTCCAATGTTGCCGGAATTCTCCAACTCAGTGAGGCTCAAATACGTGAAGCTAGGCTACCAATACCTTGTGAACCACATTATCACCCTCACCCTCATCCCCATCATGCTCGCCGTCTTCCTCGAAGTTCTTCGCTTAGGCCCTTCCGAAATCCTCAACCTCTGGAGATCCCTCCACCTCGATCTCCTCCAAATCCTCTGTTCCGCCTTCCTCATCATCTTCATGGCCACTCTCTACTTCATGTCCAAGCCTCGCACTATCTTCCTCGTGGATTACGCGTGCTTCAAGCCCCCCGTCACGTGCCGCGTCCCCTTCGCTACCTTCATGGAACATTCTAGACTCATCCTCAATAACAACCCGAAGAGCGTCGACTTCCAGATGAGGATTCTAGAACGTTCGGGACTCGGAGAAGAAACCTGCCTCCCGCCTTCTATTCACTACATACCTCCTAAGCCCACCATGGAAGCTTCCAGATCTGAAGCCGAACTCGTCATCTTCTCCGCCATGGATACTCTGTTCAAGAAAACAGGGCTCAAACCCAAGGACATCGATATCCTCATAGTCAATTGCAGCTTGTTCTCCCCCACGCCTTCACTATCCGCCATGGTTATTAACAAATACAAGCTCAGAAGCAACATCAAGAGCTTCAATCTCTCCGGAATGGGCTGTAGCGCCGGATTAATTTCAATCGATCTGGCTCGCGATCTCCTCCAAGTTTACCCAAATTCGAACGCGGTAGTGGTGAGCACTGAGATTATTACGCCTAATTACTACCAAGGCAACGAGCGAGCAATGCTTCTCCCTAATTGCCTCTTCCGTATGGGCGGCGCGGCGATTCTGCTCTCGAATCGCCGATCGGAGCGCCGGCGGGCGAAGTACAGATTGGTTCACGTGGTCCGCACGCATAAAGGAGCCGATGATAAAGCGTACAGATGCGTGTTCGAGGAAGAGGATAAAGAAGGCAAGGTCGGGATCTCGCTGTCGAAGGATCTAATGGCGATCGCCGGCGAGGCTCTGAAATCGAACATCACGACGATGGGACCGCTGGTGCTTCCGGCGTCGGAGCAGCTCCTCTTCCTCGTGACGCTGATCGGGAGGAAGATCTTCAACCCGAAGTGGAAGCCATACATTCCGGATTTCAAGCAAGCGTTCGAGCATTTCTGCATCCACGCCGGCGGGAGGGCGGTGATCGATGAGTTGCAGAAGAATCTACAGCTGTCGGCGGAGCACGTGGAGGCGTCGAGGATGACGCTGCATCGGTTCGGCAATACGTCGTCGTCTTCGCTGTGGTACGAGCTGAACTATATAGAGTCCAAAGGGAGGATGAAGAAAGGGGAAAGGGTATGGCAGATTGCGTTTGGGAGTGGGTTCAAGTGTAATAGCGCGGTCTGGAAGTGTAACCGAACCATTAAGACTCCGGTCGAGGATAGTCCTTGGGCCGATTGTATCGACCGCTACCCGGTTCATATTCCGGAGATCGTTAAGCTCTAG 1497 0.5284 MPPPMLPEFSNSVRLKYVKLGYQYLVNHIITLTLIPIMLAVFLEVLRLGPSEILNLWRSLHLDLLQILCSAFLIIFMATLYFMSKPRTIFLVDYACFKPPVTCRVPFATFMEHSRLILNNNPKSVDFQMRILERSGLGEETCLPPSIHYIPPKPTMEASRSEAELVIFSAMDTLFKKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVYPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRSERRRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTMGPLVLPASEQLLFLVTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYELNYIESKGRMKKGERVWQIAFGSGFKCNSAVWKCNRTIKTPVEDSPWADCIDRYPVHIPEIVKL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0710 498 CDD CHS_like 74 466 - -
Sto11g0710 498 Pfam FAE1/Type III polyketide synthase-like protein 81 369 IPR013601 GO:0006633|GO:0016020|GO:0016747
Sto11g0710 498 PIRSF Very_long_ch_3-ktacl-CoA_syn 8 498 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto11g0710 498 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 385 467 IPR013747 -
Sto11g0710 498 SUPERFAMILY Thiolase-like 75 293 IPR016039 GO:0016746
Sto11g0710 498 PANTHER 3-KETOACYL-COA SYNTHASE 5-RELATED 7 497 - -
Sto11g0710 498 PANTHER 3-KETOACYL-COA SYNTHASE 7 497 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto11g0710 498 Gene3D - 119 467 IPR016039 GO:0016746
Sto11g0710 498 SUPERFAMILY Thiolase-like 298 468 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0710 Sto-Chr11 8103855 8105351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0710 6 498 Miscellaneous Gene Families AT1G25450 81.136 0.0 869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0710 11 8103855 8105351 Sto11g0710 11 8103855 8105351 ECH