Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0707 ATGCGGTGCATGGAGGGCTATGATGTAAGAGAAAACATCCAAAAGGAGTCAGAAACTTTTCAGCAAACCAAAATGACCCAAACACCCACAAATTGGCAACAAAAGCAGGTGGAGGGAGGGTCAGGAATTAGGATCGAGAGGGATTCATTGAGGATGAGATTGAGCTGCAATGGATGCCGCGTTCTCCGAAAAGGTTGCAGCGAAAACTGCACCATCAGGCCCTGTCTCCAATGGATCACCTCTCCTGAATCCCAAGCCAACGCCACTGTGTTTCTGGCCAAATTCTACGGCCGCGCTGGCTTGCTCAATCTCATCAATGCCGCTCCACACCACCTTCGCCCAGCTGTGTTCAAGTCGTTGCTGTACGAGTCGTGCGGGAGGATCGTGAATCCGGTGTACGGCTCCATGGGGTTGTTCTGGACGGGGGAGTGGGCCCGGTGCCAGGCCGCGGTCGACGCCGTCTTAGTGGGGTCCGAGATCAAGGCTGACGCTGACGTGGCGTCCTCTGATTTGGAGGGTGGTGCTCATGCTTCTGGCGGCGCCGCGTGTGATATACGCCACGTGTCGAGAGGGAGAGGCCGGTTCAAGAGGGTGATAAAGCCGAAAGCGCGAGTGGGTTGGGTGGACTCGTCTGTGTTAATGTTGAAGAAGGCGGGTCAGCTGGAGAATGTGTCGGAGAGCGAGAGCGTGTTGTCGGCCCAGACCGTGGAGGGTAGCTTGATGAACCGGGTCGAACCAGTGAGCGAGAGCCGGGTTGATTTGAAGTTGAGGCTTGGTTAA 780 0.5603 MRCMEGYDVRENIQKESETFQQTKMTQTPTNWQQKQVEGGSGIRIERDSLRMRLSCNGCRVLRKGCSENCTIRPCLQWITSPESQANATVFLAKFYGRAGLLNLINAAPHHLRPAVFKSLLYESCGRIVNPVYGSMGLFWTGEWARCQAAVDAVLVGSEIKADADVASSDLEGGAHASGGAACDIRHVSRGRGRFKRVIKPKARVGWVDSSVLMLKKAGQLENVSESESVLSAQTVEGSLMNRVEPVSESRVDLKLRLG 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0707 259 Pfam Lateral organ boundaries (LOB) domain 55 154 IPR004883 -
Sto11g0707 259 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 52 194 - -
Sto11g0707 259 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 52 194 - -
Sto11g0707 259 ProSiteProfiles LOB domain profile. 54 160 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0707 Sto-Chr11 8077303 8078235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0707 52 197 AS2 family AT1G67100 66.438 5.60e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto11g0707 LOB 3.1e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0707 11 8077303 8078235 Sto11g0707 11 8077303 8078235 ECH
Sto11g0707 11 8077303 8078235 Sto8g2153 8 14121685 14122606 ECH
Sto11g0707 11 8077303 8078235 Sto10g0539 10 4497109 4498202 ECH