Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0697 ATGTCTTTCTCCAATGACAACCTTTTGCATCAACAGCTTAATTTCCCATTGATTCAGTCATCTGTAAGCATAGGGGagggttcttcttcttctccatattCTGCAAAATTTCCTGAAAATAATAAGAAAGTGGTCGGACACAAAAGGAAGAGAAATAATAATGAGAGGTTGGAAGATAAACAAAAAGAAGTAATCCATCTAAGAAGAGAGAAAATCAATGAGAAGCTGAGATGTTTGCAGGAGTTGGTTCCAGGGTGCTATAAGGCAATGGGAATGGCAGTTATGTTAGATGTGATCATAAACTATGTTCTTTCACTACAGCAACAGATTGAGTTTCTGTCCATGAAGCTTTCAGCTGCAAGTATGTATTTTGATTTCAACACTTGTGAATTAGGTGCCATGGAAGGCACACAGGGTCCGTTGTTGCAGAAGGATGCTACGCAATGTGGCGCAAGTGGAAGAATCGCAGAGAGGACAGGGGCTATCTCCTAG 492 0.3882 MSFSNDNLLHQQLNFPLIQSSVSIGEGSSSSPYSAKFPENNKKVVGHKRKRNNNERLEDKQKEVIHLRREKINEKLRCLQELVPGCYKAMGMAVMLDVIINYVLSLQQQIEFLSMKLSAASMYFDFNTCELGAMEGTQGPLLQKDATQCGASGRIAERTGAIS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0697 163 PANTHER TRANSCRIPTION FACTOR BHLH75 67 144 - -
Sto11g0697 163 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 56 106 IPR011598 GO:0046983
Sto11g0697 163 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 125 IPR036638 GO:0046983
Sto11g0697 163 MobiDBLite consensus disorder prediction 29 60 - -
Sto11g0697 163 Coils Coil 50 70 - -
Sto11g0697 163 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 67 144 IPR024097 GO:0006355
Sto11g0697 163 Gene3D - 47 124 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0697 Sto-Chr11 7976515 7980039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0697 42 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 59.184 5.62e-32 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0697 11 7976515 7980039 Sto11g0697 11 7976515 7980039 ECH
Sto11g0697 11 7976515 7980039 Sto8g2165 8 14215084 14216859 ECH