Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0696 ATGTCTGCAATTACAAAGAGAGACAAGGTGATGAGTTCTAATGAAGAAGAGAGTGAGCTGAGAAGAGGCCCTTGGACTCTTGAAGAAGATAGCCTTCTCATCCACTATATTGCTCGTCATGGTGAAGGTCGTTGGAATATGCTAGCCAAAAGTGCAGGACTCAAGAGGAATGGGAAAAGTTGCAGACTGAGATGGCTTAATTACTTGAAACCAGATATCAAGAGAGGAAACCTCACCCCACAAGAGCAGCttttgatccttgaacttcATTCCAGATGGGGTAACAGGTGGTCAAAAATTGCACAGCATCTTCCTGGAAGAACAGACAATGAGATAAAGAACTACTGGAGAACGAGGGTGCAGAAACAAGCACGCCAGCTGAACATAGAATCTGGAAGCAAGAAATTCATCGATGCGGTTCGATGTTTCTGGATGCCAAGATTGATTCAACAGAATGTGAATGTGGAACAAAAACACAACCTATCTCCCTCTACTTCTAACTCTACCACCTCCTATAATTCTTCTATGTCAAACACCAACAACCTTATTCATGTTTCTAATTCTTCACAGCCTCCAATAATGTTCCCAAACACATCCTCTGCTCTTCCTAATGCTCTGTCTCCATCTCCTCCACCACCTCCACCTCCACCTGCAAATCATCAATTCCTTTCAATTCCCAGCAATAATCTTGTTCACTCTGATTCCTTACAATTCTCACAGGCTCTTGAAACTTCTGAAGTTCCAGAaagtccttattattattattattacagcaacaacaacaataataataataataatcctaTTGAGGAAAGCTGGGAGGTGAATGAGAATTGCAATAGCAATAATGGGTATGGAATGATGGAAGGACTAAACCAGGAACCAATGTCAGGGATGGAAGGTTATGAGAATTTGCAGTATGATTATGATTATCAATATCAGAGAGCAGAGAGTGATGAGTGGGTGTTTGGAAACATGGGGGGAGATACTTTATGGAACATGGATACAATGTGA 1014 0.3925 MSAITKRDKVMSSNEEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRNGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKKFIDAVRCFWMPRLIQQNVNVEQKHNLSPSTSNSTTSYNSSMSNTNNLIHVSNSSQPPIMFPNTSSALPNALSPSPPPPPPPPANHQFLSIPSNNLVHSDSLQFSQALETSEVPESPYYYYYYSNNNNNNNNNPIEESWEVNENCNSNNGYGMMEGLNQEPMSGMEGYENLQYDYDYQYQRAESDEWVFGNMGGDTLWNMDTM 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0696 337 MobiDBLite consensus disorder prediction 205 221 - -
Sto11g0696 337 MobiDBLite consensus disorder prediction 158 222 - -
Sto11g0696 337 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Sto11g0696 337 CDD SANT 24 69 IPR001005 -
Sto11g0696 337 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 37 46 IPR001345 GO:0003824
Sto11g0696 337 SMART sant 21 71 IPR001005 -
Sto11g0696 337 SMART sant 74 122 IPR001005 -
Sto11g0696 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Sto11g0696 337 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 7 336 - -
Sto11g0696 337 Gene3D - 78 120 - -
Sto11g0696 337 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Sto11g0696 337 Gene3D - 22 74 - -
Sto11g0696 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Sto11g0696 337 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Sto11g0696 337 MobiDBLite consensus disorder prediction 158 204 - -
Sto11g0696 337 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Sto11g0696 337 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Sto11g0696 337 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 7 336 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sto11g0696 337 CDD SANT 79 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0696 Sto-Chr11 7961397 7962612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0696 17 172 MYB Transcription Factor Family AT1G68320 76.282 1.38e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g0696 Myb_DNA-binding 5.9e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0696 11 7961397 7962612 Sto11g0696 11 7961397 7962612 ECH