Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0690 ATGGAGGATCCAATTGAATACCAATCCAAGAGAACTCCCACCACCACGCGCTTAAAGCTCTTCGGCTTCAGTGTCCACGAAGACACGCAATTAGATGAACAAGTCGTTGAAGATATTGACGATGTAGTAGTAGATTCTATTCCCAAGGGGGCTGCTACTTCTCCATCTGGATCTCCGGATTCCGGCGGCGGAGGCGGAGGCGGAGGCGCTGCGTTTCCTCCCTCCTCCGCTGACCGCAAGTACGAGTGTCAGTATTGTTGCCGGGAGTTTGCCAATTCGCAAGCGCTAGGCGGTCACCAGAACGCGCACAAGAAGGAGCGTCAGCAACTCAAGCGGGCGCAATTGCAAGCCACGCGCAACGCTGCCGTTTCGTTCGTGAGGAATCCGATCATCTCCGCGTTCGCCCCGCCGCCGCACCTCCTCGCTCCGCCGGGGCCCGTGGTGGTCCCCGCCGCTCAGGCCTCGTGGGTGTACGTGCCGCCGCAAGCACGTGCCGCGCCGTCTCCCTTCCACGTGTCGGTCTCGCACGGGTGCGTGTTCCCGTCGTCGTCGGCGAGTTATAATAATAGTGGTGGGAGCAGTGGAATTACGGGTGGTGGGAGATCTGGTGCGGCGGGTGTAGGGATGCTACCGTATGGTGGCGGTGTAGGGGATTCTTCACCCGCATTCTCGTCCATGGGATCGCAAGTACTGGCTCGGGTCAACGGGAGGGTGGATGGGCCTTCCTTGGGTAGGTTCTCCAAAGGGGATGGTGGGCCCAATCTGGATGATGCATTGGGCTTGGACTTGCATCTAAGCCTTGCGCCGGCTGCGCCTTGA 819 0.5983 MEDPIEYQSKRTPTTTRLKLFGFSVHEDTQLDEQVVEDIDDVVVDSIPKGAATSPSGSPDSGGGGGGGGAAFPPSSADRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPPGPVVVPAAQASWVYVPPQARAAPSPFHVSVSHGCVFPSSSASYNNSGGSSGITGGGRSGAAGVGMLPYGGGVGDSSPAFSSMGSQVLARVNGRVDGPSLGRFSKGDGGPNLDDALGLDLHLSLAPAAP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0690 272 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Sto11g0690 272 SUPERFAMILY beta-beta-alpha zinc fingers 78 108 IPR036236 -
Sto11g0690 272 PANTHER ZINC FINGER PROTEIN GIS3 8 272 - -
Sto11g0690 272 Gene3D Classic Zinc Finger 73 128 - -
Sto11g0690 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Sto11g0690 272 MobiDBLite consensus disorder prediction 47 74 - -
Sto11g0690 272 PANTHER ZINC FINGER PROTEIN 5 8 272 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0690 Sto-Chr11 7905123 7905941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0690 1 270 C2H2 Transcription Factor Family AT1G68360 45.745 4.57e-53 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0690 11 7905123 7905941 Sto11g0690 11 7905123 7905941 ECH