Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0688 ATGGGGACAGGTTCCAAAATGGAGGGAACTTCTGCCCCATCAATTCGACGAGACCCATACGAGGTATTGTCCGTGTCTAGGGACGCTAATGATCAGGAAATAAAAACGGCTTACAGAAAGCTCGCTCTCAAGTACCACCCTGACAAGAATGCTAACAATCCTGAAGCTTCAGAATTATTTAAAGAGGTTGCATATTCTTATAATATCTTATCTGATCTGGAGAAGAGAAGGCAGTATGACAGTGCAGGATTCGAGGCACTTGATGCTGATAGCTTGGAAATGGAAATTGATCTATCTAATCTTGGAACTGTTAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTGCCTATCAAGACTACCATTTCCGCTAATGTTCTTGAAGAAGCCCTGAATGGCACTGTTACTGTCAGACCCCTTCCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAACAATGTGCTCATTTTTTTGGTGTGACAATAAGTGAGGAGCAAGCTGAGTCAGGGATTGTAGTAAGAGTTACTTCAACTGCTCAAAGCAAATTCAAGTTACTCTACTTTGAACATGATGCAAACGGTGGCTATGGTTTGGCATTGCAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCAGGCATGTATTTCTTACATTTTCAGGTGTACAGAATGGATGCAACAATGAATGCGTTAGCAATGGCCAAGGATCCTGAAGCTGCCTTCTTCAAGAGGTTGGAAGGCCTTCAACCTTGTGAAGTCTCAGAACTAAAGCCTGGCACTCATATATTTGCTGTTTACGGGGATAACTTCTTTAAGACTGCTACCTATACAATCGAGGCACTTTGTGCAAGATCTTATGAGGATACCACTCAAAAACTTAAGGACATTGAAGCTCAAATTCTAAGAAAGAGGAATGATTTGCGCCAATTTGAATCAGAATACAGAAAGGCACTGGCACGCTACCAAGAAGTGACGGAAAGATATACCCGAGAAAAACAATCAGTATGTTCTTATACTCTGTGA 1029 0.4198 MGTGSKMEGTSAPSIRRDPYEVLSVSRDANDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDLEKRRQYDSAGFEALDADSLEMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTISEEQAESGIVVRVTSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDATMNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTATYTIEALCARSYEDTTQKLKDIEAQILRKRNDLRQFESEYRKALARYQEVTERYTREKQSVCSYTL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0688 342 Pfam DnaJ domain 18 80 IPR001623 -
Sto11g0688 342 CDD DnaJ 18 72 IPR001623 -
Sto11g0688 342 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 4 337 - -
Sto11g0688 342 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Sto11g0688 342 PRINTS DnaJ domain signature 20 38 IPR001623 -
Sto11g0688 342 PRINTS DnaJ domain signature 38 53 IPR001623 -
Sto11g0688 342 PRINTS DnaJ domain signature 55 75 IPR001623 -
Sto11g0688 342 PRINTS DnaJ domain signature 75 94 IPR001623 -
Sto11g0688 342 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Sto11g0688 342 SMART dnaj_3 17 75 IPR001623 -
Sto11g0688 342 Gene3D DnaJ domain 3 100 IPR036869 -
Sto11g0688 342 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 337 - -
Sto11g0688 342 SUPERFAMILY Chaperone J-domain 17 87 IPR036869 -
Sto11g0688 342 MobiDBLite consensus disorder prediction 1 22 - -
Sto11g0688 342 Coils Coil 288 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0688 Sto-Chr11 7884633 7888852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0688 10 90 C2H2 Transcription Factor Family AT1G74250 39.535 5.89e-11 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0688 11 7884633 7888852 Sto11g0688 11 7884633 7888852 ECH