Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0684 ATGGCGATTCCCTCTTACTCTTACTTCGTTCTTCTAGCTTTCCATTTCCTTCTTCTCGTCGAATCATCCAAAAACCCAGATTTAGATGCTCTCATGGCATTCAAAGCCGCTTCCGATACCCACAACAAGCTCACAACCTGGAACTCCACCTCCGACCCATGTACATCCTGGACCTTCGTCTCTTGCTTCAAGAACCGAGTCTCGCGACTCGTCCTCGAGAATCTCGATCTTTCCGGCTCCATCGAACCCTTAGCCTCGCTCACTCAGCTCCGCGTCCTGAGCCTGAAACGTAACCGTTTCTCCGGTCCCATTCCGAGTCTGTCCAATTTCACAGCTCTCAAGCTTCTCTTTCTGTCTCACAACGGTTTCTCCGGCCCGTTTCCGGCGACGGTTACGTCGCTGGTCCGCCTCTACCGTCTTGATCTGTCGCACAACAACTTGTCCGGGAATATTCCGGCGACGGTTAACCGTCTCTCCCACCTTCTCACTCTCCGGCTAGACCAGAACCGGTTCTCCAGCCACATTCCCGTTCTGAACCTTCGCAATCTCCAAGACTTCAACGTCTCCGGTAACCGCCTCTCCGGCGAAATACCCAAATCGCTCTCGGGTTTCCCCGAATCGTCGTTCGCTCAGAACCCGGCTCTATGTGGGGCCCCTTTGGTGAAATGCGGCGAGTCCAGATCTGCGGGAGCCATAGCGTCGCCATTGAAATCAGGAAGCAGCAATCCTCCAATGCCTAGAAATTCAGCTAATGGAGCTCCGAAAATGAGCAGAGCGACAATAATCGCCATCGTACTCGGCGACGTTTTGGTTCTTAGCGTAATATCCCTTCTCCTCTACTGCTACTTCTGGCGAACCTACTCCGCTAAATTGAAAGAGGGAAAAGGGTCGGGCTCGGGTCCGGGTTCGAACCTTCTGGAAAGCGAGAAGATCGTGTACTCATCGAGTCCGTACCCGTCGTCGCAACCCGGGTTCGAGAAGGGGCAAATGGTGTTCTTCGAGGGGTTGAAGAGGTTTGAGCTGGAGGATTTGCTTCGAGCTTCGGCTGAAATGCTGGGAAAAGGAGGGTTTGGGACGGCGTATAAGGCTGTTCTTGAGGATGGGAATGTCGTGGCCGTGAAGAGGCTTAAGGACGCTCAGATTAATGGGAGGAAAGAGTTCGAGCAACACATGGAAGTGTTGGGAAGGTTAAGGCATGTGAATGTTGTGAGCTTGAGAGCTTACTATTTTGCGAGAGAGGAGAAGCTTCTGGTGTATGATTACATGCCCAATGGTAGCTTGTTTTGGCTCCTTCATGGGAACCGAGGACCCGGGCGAACCCCTCTGGACTGGACCACAAGGCTCCAAATAGCATCCGGCGTGGCGAGAGGTTTAGCCTTCATTCACACCTCATGCAAGGCCCTTAAACTCACCCACGGTAACATCAAATCCACCAACATCCTCATCGACAAGGACGGAAACGCATGCGTGTCAGATTTCGGGCTCTCCACCTTCGCAATCCCGTCATCGTCATCTACTCCCAGATCCAACGGCTACCGTGCTCCCGAAGCACTGGACGGTCGAAAACAGCACTCCCACAAATCCGACGTGTACTCCTTCGGTGTCCTCCTGCTGGAGCTTCTCACAGGGAAGTGCCCCTCCGTGGTGGACACAGGTGGGCCCGTGGACCTACCCAGGTGGGTCCAGTCTGTGGTGAGGGAGGAATGGACGGCTGAGGTGTTCGATATTGAGCTGATGAGGTATAAGGACATTGAGGAGGAAATGGTGGGGCTGCTTCAGATCGCTATGTCTTGTGCTGCGGCCGCGCCCGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATCGAGGAGATTCGCAGTGGGGTCGACATGTCGCCGCCGTGTCATGACACGTCGGACTCCGTGTCTGAGTCACCGTCCTTGTCTGAAGATGCATGCGGAGGTAGTCAGTAG 1956 0.5419 MAIPSYSYFVLLAFHFLLLVESSKNPDLDALMAFKAASDTHNKLTTWNSTSDPCTSWTFVSCFKNRVSRLVLENLDLSGSIEPLASLTQLRVLSLKRNRFSGPIPSLSNFTALKLLFLSHNGFSGPFPATVTSLVRLYRLDLSHNNLSGNIPATVNRLSHLLTLRLDQNRFSSHIPVLNLRNLQDFNVSGNRLSGEIPKSLSGFPESSFAQNPALCGAPLVKCGESRSAGAIASPLKSGSSNPPMPRNSANGAPKMSRATIIAIVLGDVLVLSVISLLLYCYFWRTYSAKLKEGKGSGSGPGSNLLESEKIVYSSSPYPSSQPGFEKGQMVFFEGLKRFELEDLLRASAEMLGKGGFGTAYKAVLEDGNVVAVKRLKDAQINGRKEFEQHMEVLGRLRHVNVVSLRAYYFAREEKLLVYDYMPNGSLFWLLHGNRGPGRTPLDWTTRLQIASGVARGLAFIHTSCKALKLTHGNIKSTNILIDKDGNACVSDFGLSTFAIPSSSSTPRSNGYRAPEALDGRKQHSHKSDVYSFGVLLLELLTGKCPSVVDTGGPVDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMSCAAAAPDQRPRMSHVVKMIEEIRSGVDMSPPCHDTSDSVSESPSLSEDACGGSQ 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0684 651 Pfam Protein kinase domain 350 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0684 651 MobiDBLite consensus disorder prediction 623 651 - -
Sto11g0684 651 MobiDBLite consensus disorder prediction 502 523 - -
Sto11g0684 651 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Sto11g0684 651 Gene3D Ribonuclease Inhibitor 19 81 IPR032675 -
Sto11g0684 651 PANTHER - 22 636 - -
Sto11g0684 651 MobiDBLite consensus disorder prediction 628 651 - -
Sto11g0684 651 CDD STKc_IRAK 352 619 - -
Sto11g0684 651 SUPERFAMILY Protein kinase-like (PK-like) 350 617 IPR011009 -
Sto11g0684 651 ProSiteProfiles Protein kinase domain profile. 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0684 651 Gene3D Phosphorylase Kinase; domain 1 322 421 - -
Sto11g0684 651 Gene3D Transferase(Phosphotransferase) domain 1 422 631 - -
Sto11g0684 651 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Sto11g0684 651 Gene3D Ribonuclease Inhibitor 82 230 IPR032675 -
Sto11g0684 651 MobiDBLite consensus disorder prediction 233 248 - -
Sto11g0684 651 SUPERFAMILY L domain-like 35 220 - -
Sto11g0684 651 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 636 - -
Sto11g0684 651 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0684 Sto-Chr11 7856159 7859583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0684 27 650 Receptor kinase-like Gene Family AT1G68400 65.639 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto11g0684 Pkinase 1.1e-38 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0684 11 7856159 7859583 Sto11g0684 11 7856159 7859583 ECH