Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0680 TTGATTAGGATAAATTGTGTTACGAgtgcatttattattattatttttaatatgactACCAATGGACAATCTTCCGGCGGTAGCCATCACGTCAGAGACTTATTCTGCAACGCCGGTGCGGGTGCCTCTGCCGGGGCAATAGCGGCTACATTTGTTTGCCCATTGGATGTGATCAAGACTAGACTACAAGTTCATGGTCTTCCCCAAGGACAGAAAGGTAGTGTTATAGTCACGAGCTTGCAGAATATAGTAAGGACTGAAGGTTTCAGGGGAATGTACCGTGGCTTGTCACCTACAATACTGGCATTACTTCCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAAGGCCGGCTCCGTTCACATGATGGTTGTGACCACCTTACAACCGGTGAAAATATGATCGCTGCTGCCGGTGCTGGGGCAGCAACAGCATTGTCAACAAATCCATTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGAGGCCTGACGTTGTTCCTTACAAAAGTGTTCTTTCTGCTTTGAGAAGGATTACCCACGAGGAAGGCTTGCGAGGGCTATATAGTGGCATTTTGCCTTCATTGGCTGGCATAAGTCACGTTGCAATACAATTTCCATCATACGAAAAGATCAAGTCATACATAGCAAAAAGAGTTGCTTACCAaatgaaaatttcaaatatttcaGAAAACACAACGGTTGACAAACTAAGTCCTGGAAACGTTGCCATTGCATCTTCAATTTCCAAAGTAGTTGCCTCTGTAATTACTTATCCTCATGAGGTAATACGATCCCGGCTACAGGAGCAAGGCCAGTCCAAAAATGCCAAGGCCCGATATGCCGGGGTTGTTGATTGTACTAGGAAGGTGTTCCAAAAGGAAAGCCTTGCTGGCTTTTACCGCGGTTGTGCAACCAATCTAATAAGAACTACTCCATCAGCTGTTATTACATTCACCAGTTATGAGATGATATACAGGTTCTTCCATAGGGTTATACCTGAGGACAAAGGGTATCCACAAGGCTATCCTAAATCCAATGACCTTAACAAGCCCCAGCCAGAAAACAGTGACACAAATTTAAAGAAAGGCCCTGTGTTATGA 1113 0.4295 LIRINCVTSAFIIIIFNMTTNGQSSGGSHHVRDLFCNAGAGASAGAIAATFVCPLDVIKTRLQVHGLPQGQKGSVIVTSLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTVYEQLKGRLRSHDGCDHLTTGENMIAAAGAGAATALSTNPLWVVKTRLQTQGMRPDVVPYKSVLSALRRITHEEGLRGLYSGILPSLAGISHVAIQFPSYEKIKSYIAKRVAYQMKISNISENTTVDKLSPGNVAIASSISKVVASVITYPHEVIRSRLQEQGQSKNAKARYAGVVDCTRKVFQKESLAGFYRGCATNLIRTTPSAVITFTSYEMIYRFFHRVIPEDKGYPQGYPKSNDLNKPQPENSDTNLKKGPVL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0680 370 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Sto11g0680 370 PRINTS Mitochondrial carrier protein signature 250 272 IPR002067 GO:0055085
Sto11g0680 370 PRINTS Mitochondrial carrier protein signature 95 115 IPR002067 GO:0055085
Sto11g0680 370 PRINTS Mitochondrial carrier protein signature 145 163 IPR002067 GO:0055085
Sto11g0680 370 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Sto11g0680 370 PANTHER BNAA09G28490D PROTEIN 21 339 - -
Sto11g0680 370 Pfam Mitochondrial carrier protein 130 221 IPR018108 -
Sto11g0680 370 Pfam Mitochondrial carrier protein 241 333 IPR018108 -
Sto11g0680 370 Pfam Mitochondrial carrier protein 36 122 IPR018108 -
Sto11g0680 370 SUPERFAMILY Mitochondrial carrier 32 327 IPR023395 -
Sto11g0680 370 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 21 339 IPR044712 GO:0006862|GO:0055085
Sto11g0680 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 218 IPR018108 -
Sto11g0680 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 331 IPR018108 -
Sto11g0680 370 MobiDBLite consensus disorder prediction 342 370 - -
Sto11g0680 370 MobiDBLite consensus disorder prediction 349 363 - -
Sto11g0680 370 Gene3D Mitochondrial carrier domain 126 339 IPR023395 -
Sto11g0680 370 Gene3D Mitochondrial carrier domain 4 125 IPR023395 -
Sto11g0680 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 120 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0680 Sto-Chr11 7809117 7812512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0680 18 364 Chloroplast and Mitochondria Gene Families AT1G25380 64.387 3.84e-146 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0680 11 7809117 7812512 Sto11g0680 11 7809117 7812512 ECH