Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0672 ATGATGGCTCCTTCGGTTTATCTGTGTAGTAGGATCCTAATTCTTCTTTcacatcttcttcctcttctctgggCTACACAAGGATGTGTCCATGAGCATTTACCAAACTGCCCTTCCTCATTTGACTGTGGATATCTTGGCAAAATCCACTTCCCTTACACCACCACACAACACACAGATTGTGGCCTTTTACAAATCAATGGCTGCAATAATCCCAGAGCTACTAAAACTATACTAACCAAAGGAAGAACACCCTTTGAGTTTGAGGTTATAAGTGTGACCACTGAATCTACCATTCTTCTTAGAGACTTGGACCTCCACGAGCGTTTAAGAAACAAAAGCTGTGAGGCTTTTAGTAAAAATTACACTCTTCCACCTCCTTTGAGTTCTTCTTTCAACATCATCAGAAACAATGGGGTTTTGTTTAGATGCAATAGGAATAGGACTCTTCATGTGATGACACCTCCTGATGATGCACGTTTCTTTACATATCCATGTGGTGATGACTATGATATCTTGTATGGCTATAGTAGTGCTTACTCAAATAATAGTGAGAGGCATAGGTTGTTATTATCTGAAAATTGTTCCGTTATTTATTTCCCCATGAAAGACCTGCCTGATAATTCTGACCCTTTCACTTTTGTAACCTCTGAGATCGTTCTTCGATTGTCCGATGATGAGTGTAGTGAGTGTTACCGTAAAAGGACAGGACATTGCAGATTTGTCGGCAACCAAACGTTTTACTGTCATAGAGATGGTATGAGCAGGGGATTGAAGATGGGGCTTGGACTAGGACTAGGTTTTGGAATTGGGCTTCCAGTGATTGTGATAATTGGGTGGCTCATAGGACGGCATtgcaaaagaaaatattattcttCTAATGATCAATTGGAATCAAGAGAGATGTATTCTGATACATACTCAAATCCAGATCCAGAAAATGGCAGTATATACTTTGGAGTCCCACTTTTCTCTTACAAGGAGCTTAAAGAAGCAACCAATAACTTCGATCACACGAGAGTACTTGGTGATGGAGGCTTTGGAATTGTTTACTATGGAAAACTACGAGACGGTCGAGAAGTAGCAGTGAAGCAGCTATACGAGCACAACTTCCGCCGCGTAGAACAATTCCGTAACGAAGTAAAGATTCTCGCTAACCTCCGTCACAAGAATCTCGTCTCCCTCTACGGTTGCACTTCACGCCAAAGCCGTGACCTCCTCCTCGTCTACGAATACATCTCAAACGGCACCGTTTCATCTCACCTCCACcactcctcctcttcctccccCCTCCACCACGCGCCTCTTCCCCTCTCCTGGCCCACGCGCCTCAAGATCGCCATCGAAACCGCCAGCGCCCTCGCCTACCTCCACGCCTCCGACATCATCCACCGCGACGTCAAGACGAACAACATCCTCCTCGACGCCAATTTCACCGTGAAGGTCGCCGATTTCGGGCTCTCCAGGATGTTCCCGAACGACGCGTCGCACGTGTCGACGGCGCCGCAGGGGACGCCGGGGTATGTGGATCCGGAGTATTACCAGTGCTATCAGTTGACGAGCAAGAGCGATGTGTATAGCTTCGGAGTGGTGTTGATGGAGCTGGTCTCGTCGAAGGCGGCGGTGGATATGAGTCGGAGCAAGGAGGAGGTGAATCTGTCGAATCTGGCGGTGAGGAAGATCCAGGAGAGCGCGTTTGGGGAATTGGTGGATCCGAGGTTGGGGATGGAGAGGGATGGGGAGGTGAGGAGGATGGTGGTGTCGGTGGGGGAATTGGCGTTTCAGTGCTTGCAGAGAGATAGGGATTTGAGGCCTTCGATGGATGAGGTTTTGGAGGCGTTGAAGAGGATTGAGATTGGGAGTGGAGGTAAGGTTGATGTGGAGGATTTGGAAGCGGGTGAGGGTAATGTGAGTACGGTAACGCCGGCGGCAACTCCGCCGCCGCCTAGTCCGCCGCCGATGTCGCCGGATTGGGAAGAGGTTGGGttgttgaagaagatgaaggcgCGTCCTAATTCGCCCAATTCTGTGACTGATAAATGGAAGAGTGAAGCTACCACTCCTAATGTTAGTCATTGA 2079 0.4632 MMAPSVYLCSRILILLSHLLPLLWATQGCVHEHLPNCPSSFDCGYLGKIHFPYTTTQHTDCGLLQINGCNNPRATKTILTKGRTPFEFEVISVTTESTILLRDLDLHERLRNKSCEAFSKNYTLPPPLSSSFNIIRNNGVLFRCNRNRTLHVMTPPDDARFFTYPCGDDYDILYGYSSAYSNNSERHRLLLSENCSVIYFPMKDLPDNSDPFTFVTSEIVLRLSDDECSECYRKRTGHCRFVGNQTFYCHRDGMSRGLKMGLGLGLGFGIGLPVIVIIGWLIGRHCKRKYYSSNDQLESREMYSDTYSNPDPENGSIYFGVPLFSYKELKEATNNFDHTRVLGDGGFGIVYYGKLRDGREVAVKQLYEHNFRRVEQFRNEVKILANLRHKNLVSLYGCTSRQSRDLLLVYEYISNGTVSSHLHHSSSSSPLHHAPLPLSWPTRLKIAIETASALAYLHASDIIHRDVKTNNILLDANFTVKVADFGLSRMFPNDASHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLMELVSSKAAVDMSRSKEEVNLSNLAVRKIQESAFGELVDPRLGMERDGEVRRMVVSVGELAFQCLQRDRDLRPSMDEVLEALKRIEIGSGGKVDVEDLEAGEGNVSTVTPAATPPPPSPPPMSPDWEEVGLLKKMKARPNSPNSVTDKWKSEATTPNVSH 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0672 692 SMART serkin_6 336 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0672 692 Gene3D Transferase(Phosphotransferase) domain 1 413 621 - -
Sto11g0672 692 MobiDBLite consensus disorder prediction 637 692 - -
Sto11g0672 692 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 35 691 - -
Sto11g0672 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Sto11g0672 692 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 35 691 IPR044652 -
Sto11g0672 692 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Sto11g0672 692 SUPERFAMILY Protein kinase-like (PK-like) 311 617 IPR011009 -
Sto11g0672 692 Gene3D Phosphorylase Kinase; domain 1 312 412 - -
Sto11g0672 692 Pfam Protein tyrosine and serine/threonine kinase 339 614 IPR001245 GO:0004672|GO:0006468
Sto11g0672 692 MobiDBLite consensus disorder prediction 671 692 - -
Sto11g0672 692 ProSiteProfiles Protein kinase domain profile. 336 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0672 692 MobiDBLite consensus disorder prediction 642 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0672 Sto-Chr11 7765807 7769572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0672 41 691 Receptor kinase-like Gene Family AT1G25390 44.848 1.56e-160 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto11g0672 PK_Tyr_Ser-Thr 7.8e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0672 11 7765807 7769572 Sto11g0672 11 7765807 7769572 ECH
Sto11g0672 11 7765807 7769572 Sto8g2182 8 14371932 14377624 ECH
Sto11g0672 11 7765807 7769572 Sto10g0574 10 4842466 4845533 ECH