LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto11g0665	TTGGAGATGCTTcccttccttctccttcttctctgcAACTATCTTTCTCCTGTGACTGCTCTGAATGCCGAAGGCTCTGTGCTTTTGACTCTTAAGCAGTCCATCACCGACCCAGAAGGGTCTATGAGTAACTGGAATTATTCTGATGAAAACCCATGTTCGTGGAATGGGGTTACATGCAAGGAACACAGTATTGTGTCCATTAGTATTCCAAAGAGGAAGCTTTCTGGGTTTCTTCCTCCTGCTTTGGGATCTCTCTCTCAGCTCCGCCATGTGAATTTCAGGAACAATAAGCTCTCTGGGAAGTTGCCTCCGGAGCTATTTGAAGCACAAGGACTCCAAAGTTTGGTCCTTTATGGCAATTCCTTTTCTGGGCCTCTTCCAAAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCACAAAATTTCTTTAATGGGTCTTTACCTTCTACGATTGTCCAGTGTAAGAGACTCAAAACCCTTGTTTTAAGTCAAAACAACTTCTCAGGTCCTCTCCCAGATCCATTTGGTACTGATTTGTACTCTCTGCAGAAATTGGACCTTTCTTACAATTATTTCAATGGATCAGTCCCTAGTGACATTGGGAATCTATCAAGCCTACAAGGAACTGTTGATTTGTCTCATAATCATTTCAGTGGTTCAATCCCACCCACCCTTGGAAATTTGCCTGAGAAGGTTTATATTGATCTTACTTTCAACAATTTGAGTGGTTCAATACCACAAAATGGTGCTTTAATGAACAGAGGACCAACAGCTTTTATAGGCAATCCTGGTCTCTGTGGGCCTCCTTTGAAAAACCCGTGTTCTTCAGAAACTCCAGGTGCTAGTGCTAATTCACCTTCTTCATTTCCATTTATGCCAGAAAACAACCCACCTTCTGATAATGATTTTGGGAGAAGTGAGAATACCAAAGGGCTAAGCAAGAGTGCTATTATAGGGATTGTTGTGGGTGACATAGTTGGGATTTGCCTTTTGGGTTTGCTCTTCTCTTACTGCTACTCAAGGGTTTGTGGTCTTAATCAGGATAGTGATGAAACCAGTTTTGACAAGGGAGGtaaaggaaggaagaaagagtGCTTGTGCTTCAGAAAGGATGAATCTGAGACCTTATCTGAGAATGTTGAGCAGTATGATCTTGTTCCATTAGATTCCCAAGTGGCCTTTGATTTGGATGAGCTTCTCAAGGCTTCTGCTTTTGTTCTGGGAAAGAGTGGAATAGGCATTGTCTACAAAGTGGTGCTTGAAGATGGGCTTACCTTAGCTGTGAGAAGATTAGGGGAAGGTGGTTCTCAAAGATTTAAAGAATTCCAGACTGAAGTAGAAGCAATAGGAAGGTTGAGGCATCCTAATATTGTTACCCTTAGAGCCTATTACTGGTCTGttgatgagaagcttctcatctaTGATTATATACCCAATGGAAACCTTGCTTCAGCCATTCATGGGAAGGCAGGACTCGTGGCATTCACACCACTATCTTGGTCGATTCGGCTGAAAATCATGAAAGGAATTGCAAAAGGATTGGTCTACCTGCATGAGTTTAGCCCGAAAAAATATGTCCACGGCGATCTGAAGCCGAGTAACATTCTACTTGGGCATAGCATGGAACCCCACATTTCTGATTTTGGACTTGGAAGACTAGCAAACATTGCTGGAGGGTCTCCAACCTTGCAATCGAACCGAGTCGCGGCCGAGAAACCCCATGAAAGGCAAAAGAGCTTATCAGCATCAGAAGTCGCAGCTAATGTCTTGGGAACAGGTTATCAAGCTCCAGAAGCACTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTGTATTCATATGGTGTGATTTTGCTGGAAATGATCACAGGAAGATTAGCAATTGTCCAAGTGGGAAACACAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGAGGAGAAGAAGCCGCTCTCGGACGTGTTAGACCCGTATTTACCCGAAGATGCAGATAAAGAAGAGGAGATCATTGCAGTTTTGAAGATTGCCATGGCTTGTGTGCATAGTAGCCCCGAGAAGAGACCGACAATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCCATTTCTTCTGACTGA	2133	0.4201	LEMLPFLLLLLCNYLSPVTALNAEGSVLLTLKQSITDPEGSMSNWNYSDENPCSWNGVTCKEHSIVSISIPKRKLSGFLPPALGSLSQLRHVNFRNNKLSGKLPPELFEAQGLQSLVLYGNSFSGPLPKEIGKLRYLQTLDLSQNFFNGSLPSTIVQCKRLKTLVLSQNNFSGPLPDPFGTDLYSLQKLDLSYNYFNGSVPSDIGNLSSLQGTVDLSHNHFSGSIPPTLGNLPEKVYIDLTFNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSETPGASANSPSSFPFMPENNPPSDNDFGRSENTKGLSKSAIIGIVVGDIVGICLLGLLFSYCYSRVCGLNQDSDETSFDKGGKGRKKECLCFRKDESETLSENVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGNLASAIHGKAGLVAFTPLSWSIRLKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHSMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSLSASEVAANVLGTGYQAPEALKVVKPSQKWDVYSYGVILLEMITGRLAIVQVGNTEMDLVQWIQFCIEEKKPLSDVLDPYLPEDADKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSISSD	710

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto11g0665	710	Gene3D	Ribonuclease Inhibitor	181	280	IPR032675	-
	Sto11g0665	710	Gene3D	Transferase(Phosphotransferase) domain 1	481	709	-	-
	Sto11g0665	710	Gene3D	Ribonuclease Inhibitor	21	180	IPR032675	-
	Sto11g0665	710	Pfam	Protein kinase domain	411	700	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto11g0665	710	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	4	709	-	-
	Sto11g0665	710	ProSiteProfiles	Protein kinase domain profile.	405	705	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto11g0665	710	CDD	STKc_IRAK	411	705	-	-
	Sto11g0665	710	MobiDBLite	consensus disorder prediction	279	294	-	-
	Sto11g0665	710	MobiDBLite	consensus disorder prediction	275	311	-	-
	Sto11g0665	710	Gene3D	Phosphorylase Kinase; domain 1	373	480	-	-
	Sto11g0665	710	Pfam	Leucine rich repeat N-terminal domain	22	60	IPR013210	-
	Sto11g0665	710	SUPERFAMILY	L domain-like	23	275	-	-
	Sto11g0665	710	SMART	serkin_6	410	706	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto11g0665	710	SMART	LRR_typ_2	134	158	IPR003591	-
	Sto11g0665	710	SMART	LRR_typ_2	86	110	IPR003591	-
	Sto11g0665	710	SMART	LRR_typ_2	183	207	IPR003591	-
	Sto11g0665	710	PANTHER	RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1	4	709	-	-
	Sto11g0665	710	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	529	541	IPR008271	GO:0004672\|GO:0006468
	Sto11g0665	710	SUPERFAMILY	Protein kinase-like (PK-like)	410	702	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto11g0665	Sto-Chr11	7702991	7705330	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto11g0665	1	710	Receptor kinase-like Gene Family	AT2G01210	68.793	0.0	1002

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Sto11g0665		Pkinase	1.3e-33	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto11g0665	11	7702991	7705330	Sto11g0665	11	7702991	7705330	ECH