Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0661 ATGGAGGTTCCGGCCACCGCTCCTCCACTCTCCTCCGCCGTAGCCCCACCACCTCATGTCAACTATCCTGACTCTCTCGACTCCTCTCCTCGCTCTCGCAACACCGATTCCTGGGATGAGCCTTACCCTCcctcctccgccgccgccgctgTCGCCTCTAATAAGCTCCGCCTTATGTGCAGCTACGGCGGCCACATCGTCCCTCGCCCCCACGATAAGTCCCTCTGTTACGTCGGTGGCGATACGCGTATTGTCGTCGTTGAGCGACACACCTCGCTCTCTGACCTCTCCTCGCGCCTCTCCAAAACCTTCCTCAACGACCGTCCCTTCACTCTCAAATACCTTCTCCCCAGTGAAGACTTAGATTCGCTTATCTCTGTTACTACCGATGAGGACCTGGATAACATGATCGAAGAGTACGATCGAATTTCTAATTCTTCGGTGAAACCCTCTCGAATCCGCCTTTTCCTGTTCCCGCTGAAACCCGATTCGTCTCAATCGATTCCTGTAATTAATAGCTCAGGGAAGTCGGAGGATTGGTTTTTGGGTATGCTTAACAGAGGATTGTCGGACTCTGGTTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTGTTGCCGGAAATCTCGATGCGGGTTCGAAAGACGTCGATGCTGCGACTTCTGGATCTTTTGGGAATGGTAAGGGTGTGAAGCAGCAGGGACAGGATGTTCACTCTGTGCCCGATTCACCTATGCTGGAAACGTCCTCGTCCTTTGGGTCCACCTCTTCATCGCCTTCGCTGGCGAATTTGCCTCCGATTAGGGTCCATGTTGATGATGGCAGTGGTGGTGGAGCTAGGGTACAGGATCAGAAGGCGGTGGGAATTGAGGATCAGTTTGGGCAAATGGGTGTTAGTGGCGCTCAGAAGCAAGATGAGGGTTTTGCTTTGTCTTCGCCTCCTACTGTGCCGGCAGTCTCTGCCGTGCCAGGTGTGCCGATCAGCTCTACGGTGGTTTCCGGTGAATACCAGAATCGTGTTGTCTCCGATGATGAGAGATCAGACCATGGAGTCCCTGTAGGTTATAGAAAACCTCCTACACAACAGCTTCAGCCTCAGATTCTGCCTACACAACTTCAACAGAAGACTACCGGAGGCCTTGATTTGGCTTCCCCAGATTCAGTTTCAAGTGACAATAGTTTTACAACTGCAATGTCACGCCCAAAACCTGTGGTCTATCAAGACCAAGTTCAAGTTCAAGTCCAAATTCCCTCTGCAACTACTAGGGTTCCCAGTAACCCTGTGGATCCAAAATTTACTATGTCTGATTCACATGGGGCTGTGCCAATCCAGACATACTATCCTGTATATCCTTCCCAGCAGCAGCTCCACCCCCAGCCTCATCATCAGCTGGAACAACAACAGTATCAGTATTACATTCTACCTGCAAGGCAGACCCAACCTTACAACTTGTCCTCCCAGCAACCTAATATTAGTGAACCTGCCACTACCATCCAGTCTAGCCATGCCCCAACAACATCGAATCCTGCTCTAGTTCAACAATCTGCAGCTTACAACCCCATGAGAAGTGCTGCAGTACCGAAATCTGAAATGACAGCGGGTGGATACAGAACAGCAGTTGCAGGCACCCCTCAATTGGTTCAGGTTCCTGCGGGTCAGCCGCAGCAACAGTTTGTTGCCTATTCCCAGTATCATCATCCGTCTCAGTCTGTTGCTCCTACTTCTGCTGCTCCTGCTAGTTATGCTTATGAGTATGCTGATCCTGCTCATGCCCAAATATACTACTCCCAACCTCTGCCTCCCACAATGCCTTCACAATACCAAACTATGGCAGGTGGTGCTGCTGCAGCAGAACCTTCTGCTCAGCCTCCCTCAGACAGCATGAAGCAGCAAATAAGAACCTCACAGCCATTGTAA 1920 0.5016 MEVPATAPPLSSAVAPPPHVNYPDSLDSSPRSRNTDSWDEPYPPSSAAAAVASNKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERHTSLSDLSSRLSKTFLNDRPFTLKYLLPSEDLDSLISVTTDEDLDNMIEEYDRISNSSVKPSRIRLFLFPLKPDSSQSIPVINSSGKSEDWFLGMLNRGLSDSGSVNLLMGFDDEVVAGNLDAGSKDVDAATSGSFGNGKGVKQQGQDVHSVPDSPMLETSSSFGSTSSSPSLANLPPIRVHVDDGSGGGARVQDQKAVGIEDQFGQMGVSGAQKQDEGFALSSPPTVPAVSAVPGVPISSTVVSGEYQNRVVSDDERSDHGVPVGYRKPPTQQLQPQILPTQLQQKTTGGLDLASPDSVSSDNSFTTAMSRPKPVVYQDQVQVQVQIPSATTRVPSNPVDPKFTMSDSHGAVPIQTYYPVYPSQQQLHPQPHHQLEQQQYQYYILPARQTQPYNLSSQQPNISEPATTIQSSHAPTTSNPALVQQSAAYNPMRSAAVPKSEMTAGGYRTAVAGTPQLVQVPAGQPQQQFVAYSQYHHPSQSVAPTSAAPASYAYEYADPAHAQIYYSQPLPPTMPSQYQTMAGGAAAAEPSAQPPSDSMKQQIRTSQPL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0661 639 Pfam PB1 domain 71 159 IPR000270 GO:0005515
Sto11g0661 639 PANTHER EXPRESSED PROTEIN 439 630 - -
Sto11g0661 639 PANTHER EXPRESSED PROTEIN 10 439 - -
Sto11g0661 639 SUPERFAMILY CAD & PB1 domains 71 167 - -
Sto11g0661 639 SMART PB1_new 70 160 IPR000270 GO:0005515
Sto11g0661 639 MobiDBLite consensus disorder prediction 221 281 - -
Sto11g0661 639 MobiDBLite consensus disorder prediction 378 397 - -
Sto11g0661 639 MobiDBLite consensus disorder prediction 226 264 - -
Sto11g0661 639 MobiDBLite consensus disorder prediction 596 639 - -
Sto11g0661 639 MobiDBLite consensus disorder prediction 1 46 - -
Sto11g0661 639 CDD PB1_UP2 59 158 - -
Sto11g0661 639 PANTHER OS05G0427100 PROTEIN-RELATED 439 630 - -
Sto11g0661 639 PANTHER OS05G0427100 PROTEIN-RELATED 10 439 - -
Sto11g0661 639 MobiDBLite consensus disorder prediction 25 41 - -
Sto11g0661 639 MobiDBLite consensus disorder prediction 624 639 - -
Sto11g0661 639 Gene3D - 75 159 - -
Sto11g0661 639 ProSiteProfiles PB1 domain profile. 55 158 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0661 Sto-Chr11 7676978 7679488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0661 45 202 MAP Kinase Kinase Kinase AT1G79570 36.076 1.29e-26 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0661 11 7676978 7679488 Sto11g0661 11 7676978 7679488 ECH