Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0654 ATGGAGAGAGTTTGTGAATTCTGCTCATCTTTGAGGCCAATTGTTTATTGTAAATCTGATGAAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTTAGCGAATTCCTTGTCCGGCCGGCATCTCAGAACCCTTCTATGTAACCTATGCAGACACCATCATGCCTATGTGCAGTGTCTGGATCACCAAATTCTCATATGCCGTGGCTGCGATCAAAAGTTGCATGATCTCTCCATGAAACACCAGAAACGCGCCATCCGAAGTTACATCGGTTGCCCTTCTGCCAAAGATTTTGCAGCactttggggttttgagtttaatGACATAGAAAAGAATGCTCATTCTGATATGTTTGCATCCATTTCATATGGTTCTGCAGATTTAAATCAAACTGGAGGCACTTCAATAGTGTCTGGGGCCAAATTTGAAGGAGGATCAAGCAGTCAACAAGGTCAGAAATTGTACAAAGATCAAGAGAGACAAATTATTCTGCAGCAGATTATTGATTTGAAAAGGCTTCAGGTCGGTGAGGAGAGTAATCATTCTCTAAAGATCAATGGGTCACAAGAAACAGACATTTCTTCTTCAGCATATCATACTCAAAAGAAATATGATGACAAATGGGATCAGCAAGCACAAAATCCTCAGGAGGAAATTACTACTAATGTTCATGAAAAAGACAGTCCCATTTCAGAGCTGAAGCATGAAAGTTTGTCTTCCACATTTTCTCAACTTGATAATTTACCTTCATCTCCAATTATAGACAGTGAGTTCTTCTGGACATGCAAAAGTCCACTTCAGAGTAGTCAGCTGTGGTGTCATAATATTCAAGACCTTGGGATATGTGAAGAACTTATTGGTGAAGATGATTTTAACATACCTGATGTTGACTTAACATTCCAAAACTATGAAGAACTATTTGGGGGAGATCAAGATCCAATTAGAGGAATTCTTGGTGATAATTATGTCTCCTGCTCTTCTATAGAAAAGGATATATCACTTGACAAGTCAGATATTTACAATGAAAGCACAATAGAGGATTCTTCGGAAGCTGCATCAATGTCTATCTCCCAATCTGCTCATGAGGACAAGGATACTGATGCTACTAATGCTGAGATCAAAGGAAATTCTAGCAATTTACTGGAATTGGAGGTTGCAAACTTGGAGACTGGAGGGAATGTCACTGTGAAGTATAAAGAGAAGAAATCTCAACTGCGAGAAAAGCAAGCTCGACATCAGTCCAAGAAAGGTGGAGCTAATGTAAGAAAGAGAGTGAAAGGCCAAATTTCCAAGGCAGAAAGCTATTGA 1311 0.389 MERVCEFCSSLRPIVYCKSDEAYLCLSCDAKVHLANSLSGRHLRTLLCNLCRHHHAYVQCLDHQILICRGCDQKLHDLSMKHQKRAIRSYIGCPSAKDFAALWGFEFNDIEKNAHSDMFASISYGSADLNQTGGTSIVSGAKFEGGSSSQQGQKLYKDQERQIILQQIIDLKRLQVGEESNHSLKINGSQETDISSSAYHTQKKYDDKWDQQAQNPQEEITTNVHEKDSPISELKHESLSSTFSQLDNLPSSPIIDSEFFWTCKSPLQSSQLWCHNIQDLGICEELIGEDDFNIPDVDLTFQNYEELFGGDQDPIRGILGDNYVSCSSIEKDISLDKSDIYNESTIEDSSEAASMSISQSAHEDKDTDATNAEIKGNSSNLLELEVANLETGGNVTVKYKEKKSQLREKQARHQSKKGGANVRKRVKGQISKAESY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0654 436 CDD Bbox1_BBX-like 4 47 - -
Sto11g0654 436 MobiDBLite consensus disorder prediction 346 360 - -
Sto11g0654 436 SMART bboxneu5 48 87 IPR000315 GO:0008270
Sto11g0654 436 SMART bboxneu5 1 47 IPR000315 GO:0008270
Sto11g0654 436 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Sto11g0654 436 MobiDBLite consensus disorder prediction 398 436 - -
Sto11g0654 436 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 376 - -
Sto11g0654 436 MobiDBLite consensus disorder prediction 398 415 - -
Sto11g0654 436 MobiDBLite consensus disorder prediction 181 199 - -
Sto11g0654 436 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 376 - -
Sto11g0654 436 MobiDBLite consensus disorder prediction 346 372 - -
Sto11g0654 436 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Sto11g0654 436 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0654 Sto-Chr11 7621732 7628179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0654 1 331 C2C2-CO-like Transcription Factor Family AT1G68190 37.725 3.53e-66 214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0654 11 7621732 7628179 Sto11g0654 11 7621732 7628179 ECH