Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0631 ATGGCTTCACGCAGGCTCTTATCGTCTCTGATTCGATCCTCCACGCGTCGATCTCCATTCAAATCCTCCATTACCAGCTCAAGGCCCAGGCTTTCTCCCCCTAGCGCTTCGGCTCGTCCTTCCCCCTATGGCTACCTTCTCTCCCGCTTCGCCGAGTATGCTACCTCTGCTGCCGCTGCTGCCGCTGCTGCTTCTCCTCCCGCACCTTCCAAGGATGCCGGAGGTGGTGGCGGTGGGAAGATCGTCGATGAGTACACTGGCAAAGGTGCGATCGGGCAAGTGTGCCAGGTCATTGGTGCCGTCGTCGATGTCAGATTCGAGGAGGGTTTGCCCCCGATCTTGACTGCGCTTGAGGTTCTGGATAATTCGATCCGGTTGGTGCTGGAGGTGGCGCAGCACTTGGGTGAGAATGTGGTTAGGACTATTGCTATGGATGGGACTGAAGGGCTTATTAGAGGACAGCGCGTGCTCAACACTGGCTCTCCTATCACTGTTCCTGTTGGTAGGGCAACCCTTGGCCGTATCATTAATGTCATTGGGGAGCCTATTGATGAGAAGGGTGAAATTAATACTGAGCACTACTTGCCCATTCATAGAGAAGCTCCAGCGTTTGTGGAGCAAGCAACTGAGCAGCAGATCCTTGTGACAGGGATTAAGGTTGTGGATCTACTTGCACCATACCAAAGGGGTGGAAAGATTGGGTTGTTTGGTGGTGCTGGTGTAGGAAAAACGGTGCTTATCATGGAACTTATCAATAACGTTGCAAAGGCTCATGGTGGTTTCTCTGTGTTTGCTGGTGTTGGAGAAAGAACCCGAGAAGGTAATGACTTGTACAGAGAAATGATTGAGAGTGGTGTCATCAAGCTTGGTGAGAAGCAGAGTGACAGCAAATGTGCTCTTGTGTACGGTCAAATGAATGAGCCTCCTGGTGCTCGTGCCCGTGTTGGTCTTACTGGGCTTACTGTGGCAGAACACTTCCGTGATGCTGAAGGGCAAGATGTGCTTCTTTTCATTGATAACATTTTCCGTTTTACCCAAGCCAACTCAGAGGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCTGTCGGTTATCAACCAACACTGGCTACTGATCTTGGAGGTCTTCAAGAACGTATTACTACCACAAAGAAGGGTTCAATTACCTCTGTCCAAGCTATATATGTGCCTGCTGATGACTTGACGGATCCAGCTCCTGCTACAACCTTTGCTCACTTGGATGCTACAACTGTGTTATCACGACAGATCTCCGAGCTGGGTATTTATCCTGCTGTGGATCCCCTAGATTCTACATCTCGTATGCTTTCACCACATATTTTAGGTGAAGACCACTATAATACTGCTCGTGGTGTACAAAAGGTTCTTCAGAATTACAAGAATCTTCAAGATATCATTGCCATTTTGGGAATGGATGAGCTTAGTGAAGATGATAAGCTGACTGTCGCGCGTGCACGTAAAATTCAAAGGTTCTTGAGCCAGCCTTTCCATGTTGCAGAAGTCTTCACTGGTGCCCCAGGCAAATATGTAGAGTTGAAGGAGAGTATCAACAGCTTCCAGGGTGTGTTGGATGGCAAATATGATGACCTTCCAGAACAATCGTTTTATATGGTTGGAGGTATTGAAGAGGTCATTGCAAAGGCAGACAAGATTGCTAAGGAATCAACTTCTTAA 1689 0.4861 MASRRLLSSLIRSSTRRSPFKSSITSSRPRLSPPSASARPSPYGYLLSRFAEYATSAAAAAAAASPPAPSKDAGGGGGGKIVDEYTGKGAIGQVCQVIGAVVDVRFEEGLPPILTALEVLDNSIRLVLEVAQHLGENVVRTIAMDGTEGLIRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDEKGEINTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSDSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESINSFQGVLDGKYDDLPEQSFYMVGGIEEVIAKADKIAKESTS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0631 562 MobiDBLite consensus disorder prediction 1 40 - -
Sto11g0631 562 Pfam ATP synthase alpha/beta family, beta-barrel domain 94 160 IPR004100 GO:0046034|GO:1902600
Sto11g0631 562 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 217 438 IPR000194 GO:0005524
Sto11g0631 562 TIGRFAM atpD: ATP synthase F1, beta subunit 91 555 IPR005722 GO:0015986|GO:0045261|GO:0046933
Sto11g0631 562 Hamap ATP synthase subunit beta [atpB]. 89 556 IPR005722 GO:0015986|GO:0045261|GO:0046933
Sto11g0631 562 PANTHER ATP SYNTHASE 3 561 - -
Sto11g0631 562 ProSitePatterns ATP synthase alpha and beta subunits signature. 429 438 IPR020003 GO:0005524
Sto11g0631 562 Gene3D - 163 440 IPR027417 -
Sto11g0631 562 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 441 557 - -
Sto11g0631 562 CDD F1-ATPase_beta 162 443 - -
Sto11g0631 562 CDD ATP-synt_F1_beta_C 445 552 - -
Sto11g0631 562 Gene3D - 441 562 IPR024034 -
Sto11g0631 562 SMART AAA_5 229 501 IPR003593 -
Sto11g0631 562 PIRSF ATPase_subunit_beta 6 562 - -
Sto11g0631 562 Gene3D - 80 162 - -
Sto11g0631 562 CDD ATP-synt_F1_beta_N 90 163 - -
Sto11g0631 562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 444 IPR027417 -
Sto11g0631 562 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 88 162 IPR036121 GO:0046034|GO:1902600
Sto11g0631 562 Gene3D ATP synthase, F1 beta subunit 1 53 IPR042079 -
Sto11g0631 562 MobiDBLite consensus disorder prediction 1 34 - -
Sto11g0631 562 Pfam ATP synthase F1 beta subunit 1 49 IPR020971 GO:0000275|GO:0005524|GO:0006754|GO:0016887
Sto11g0631 562 PANTHER ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 3 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0631 Sto-Chr11 7373201 7377095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0631 127 499 Primary Pumps ATPases(2) AT1G20260 29.426 1.02e-29 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0631 11 7373201 7377095 Sto11g0631 11 7373201 7377095 ECH