Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0630 ATGGCCGCCTCGTCGTCCTCCACCAATGTCCTGCTTGCCATCTTCGAGAAGAAGACTAACCCTATCGATCTCTATCGCCCTCTCCGCAATTACATAGCTTTCCACTACTCCGAACGCGAGGCCCAGAATCTGGAAGACGACCTCCAAACCCTCAAGCAACTCCGTTCCGACCTCGAGCGCCACTCCGATCCTTCCTTCACCTCTCGCCGTGACCTCTTCCTATCGTACTACAAGGCCCTCTGCCTCGTCGAGACCCGCTTCCCCATCTCTCCCGATCAAGATCACGTCAACACTCTCAGTTTTGTGTGGTTCGATGCGTTTAAGCCAAAACAGAAGGCCGCTCAGCAGAATATTCACCTCGAAAAAGCTGCTGTGTTGTTCAATTTGGGTGCTGCTTATAGTCAGATTGGGTTGTCTTATGATCGGAGCACCGTTGATGGCCGGAGGCAGGCATCGCATGCTTTTATTGCAGCTGCTGGGTCTTTCGTATACCTGAGGGATAATGCGGCAATGAAAGCGTCAATTGGGGGTTCCACAACAGTGGATGTGTCAGTAGATTGCGCTGGAATGTTGGAGAAGTTGATGCTGGCACAGGCACAGGAGTGCGTGTTTGAGAATACCATTGCCAAAGGGAGCACTCCGGGGGTTTGTGCTAAGATCTCTAGGCAGGTGGGTCTCTACTACGAAGAAGCTTTAGCTGCCATGAATGTCGCACCTTTGAACCAGCATTTTGACAAGTCATGGATAGTTCATGTGCAGTTAAAGGCAGCTTTGTTCTATGCAGAAGCTTGTTATAGGTATGGATTAGAGCTACATGAGAAAGAAGAGATAGCAGAGGAGATTGCAAGGCTGAGGAGTGGGGTTAATGCTTTAACTGAGGCAAAGAAAAACTCCAAGGGTGCTGCAGCACAAATTCTAGACGCAATTAATAAGTTAGAGGCCAATCTTAATAGAAACTTGGAAAAGGCTGTCAAGGAGAATGAGAGAGTTTACCTCATGAGGGTCCCTTCACTCAGTTCCTTACCACCTCTTCCAGCATTTTCCTTGGTGAAGCCAATGGCAATGAATGAGTTGTTAGATGCCAGTAAAGAGAAGATGTTTGCAAGTCTTGTCCCTGACAATAGTGCTAAGGCTCTCTCTAGGTACACTGAAATGGTAGATGACATTATAAGAACACAGGCTGAAAAGTTACAACAAGCTAGTGAGCTTACACGAGTTAGGCTTAAGGAAATGGATCTACCAGATTCTATTCTTGCTCTGGAAGGTAATTTTACTCTGCCAACAGATCTCCAAGAAGATGTGGAAGCTGTGCAGATCAGTGGGGGTCCTGCTGGATTGGAAGCAGAGTTACAGCAACTTAAGGACCTTAGGAGGGTAAATCAAGAGTTGTTGGTTCAGACTGAGGAGTTATTGCAGGAGGAAGCAAGAGAAGATGCTCAATTTAGAAGCCAATTTGGGACAAAGTGGACTAGGCCTCATTCAAACACTTTGACAAAGAACTTGCAGGATAGGTTAAATAGATTTGCTGGTAACTTGAAGCAAGCTGCAGAAAGTGATAATCGAATTGAGCGTTCAGTTAAAGAACACTCAGAACTAATGTCAATCCTTGACTGCCATCCGATTGAATCTGCACTTCCAACCTTGGCAAAACCAATGATGTCCTTTGATGCCAATGAAGATGCTATTGTGGGGTCTCTCAAGCAGAGCTTGAGGCAACTAGAAACTCTGGGAGCACATAGGGCTGGTCTTGAAGATATGCTTAAAGACATGAAAAGAAAGGATGATATACTACCGAAGTTGATGACGTCTACTGGCTCTCATGAGGATCTTTTCAGGAAGGAGATAACAAAATATGACCATATTTGCGAAGAAATTGCCCAAAACATTGAGGCACAGGAGCAGCTGTTACTGCAGATACAGGCTCAAAGTGCTGAATTTTCAGCGATCTTTAATCTCGAAGATTACAAAGCCTCACGTGAAAAATGTTACAAGGAGATTGAAGCTGCCATAGCAAAGTTTCGAGAAATAAAGGACAACATCAACGAAGGGTTGAAGTTTTATGTTACCCTGCAGGATGCAATTACAAATGTGAAGCAGCAGTGCAATGACTTTATAATGACAAGAAGCATCCAGTGCAGGGAAATGATTGAAGATGTTCAGAGACAAGTGGCTGGTCTCAGTTTTCAAGATAACAAAGCCACAGCTTCTTTCAACAGCAACTATCCTTCGGTTGGACACCAAACTCAAAGCTCTAATCTTCCACAAATGGATCCTCGTCTCCAAACACCTTATTATCAGTCGCCGGAGCAACTACCAGTGGCTCCTTATGGTCACCCTCCTCCCCAATACAGTTCTGCACATCATCCTCTTTCACCTTACCACATTCCACCCACAGCAGCAGCAGCTCCATACCCACCTACTCAGGTTCATCAGCAACCACAGGCAAGCCATGAGTATGGCCAACCTGCATATCCGGGATGGCGTGGTCCATATTATAACGCGCACCCACAACAACAACCAGCTTCTGCTCCACGGCCTCCTTACTCCGTTCCAGGTCCATATCCTCCTCACCTAAGTGGCTATTATAAGCAGCAATAG 2598 0.4604 MAASSSSTNVLLAIFEKKTNPIDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSDLERHSDPSFTSRRDLFLSYYKALCLVETRFPISPDQDHVNTLSFVWFDAFKPKQKAAQQNIHLEKAAVLFNLGAAYSQIGLSYDRSTVDGRRQASHAFIAAAGSFVYLRDNAAMKASIGGSTTVDVSVDCAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAAMNVAPLNQHFDKSWIVHVQLKAALFYAEACYRYGLELHEKEEIAEEIARLRSGVNALTEAKKNSKGAAAQILDAINKLEANLNRNLEKAVKENERVYLMRVPSLSSLPPLPAFSLVKPMAMNELLDASKEKMFASLVPDNSAKALSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMDLPDSILALEGNFTLPTDLQEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQEEAREDAQFRSQFGTKWTRPHSNTLTKNLQDRLNRFAGNLKQAAESDNRIERSVKEHSELMSILDCHPIESALPTLAKPMMSFDANEDAIVGSLKQSLRQLETLGAHRAGLEDMLKDMKRKDDILPKLMTSTGSHEDLFRKEITKYDHICEEIAQNIEAQEQLLLQIQAQSAEFSAIFNLEDYKASREKCYKEIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQCNDFIMTRSIQCREMIEDVQRQVAGLSFQDNKATASFNSNYPSVGHQTQSSNLPQMDPRLQTPYYQSPEQLPVAPYGHPPPQYSSAHHPLSPYHIPPTAAAAPYPPTQVHQQPQASHEYGQPAYPGWRGPYYNAHPQQQPASAPRPPYSVPGPYPPHLSGYYKQQ 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0630 865 Gene3D alix/aip1 like domains 418 699 - -
Sto11g0630 865 Coils Coil 274 294 - -
Sto11g0630 865 Coils Coil 302 329 - -
Sto11g0630 865 Gene3D alix/aip1 in complex with the ypdl late domain 372 650 - -
Sto11g0630 865 PANTHER PCD6 INTERACTING PROTEIN-RELATED 1 855 IPR045251 GO:0071985
Sto11g0630 865 PANTHER PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN-LIKE 1 855 - -
Sto11g0630 865 MobiDBLite consensus disorder prediction 840 854 - -
Sto11g0630 865 Coils Coil 446 476 - -
Sto11g0630 865 MobiDBLite consensus disorder prediction 737 865 - -
Sto11g0630 865 CDD BRO1_Alix_like_1 11 366 - -
Sto11g0630 865 Coils Coil 622 642 - -
Sto11g0630 865 ProSiteProfiles BRO1 domain profile. 9 404 IPR004328 -
Sto11g0630 865 Pfam ALIX V-shaped domain binding to HIV 426 710 IPR025304 GO:0005515
Sto11g0630 865 Pfam BRO1-like domain 12 389 IPR004328 -
Sto11g0630 865 Coils Coil 34 61 - -
Sto11g0630 865 MobiDBLite consensus disorder prediction 737 768 - -
Sto11g0630 865 Gene3D alix/aip1 like domains 6 371 IPR038499 -
Sto11g0630 865 CDD V_Alix_like_1 372 708 - -
Sto11g0630 865 SMART BRO1_2 10 394 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0630 Sto-Chr11 7363064 7370014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0630 11 7363064 7370014 Sto11g0630 11 7363064 7370014 ECH