Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0615 ATGGCGATTCCCTATCCCCATTTCATCGCCTCCGAGAAAGCAGCTCCGCCATCGTCGTCGTTAGCCGCGGTGGCGACTTCCCCCGCGATTCTAACCCAAGACGATCTCAAGAAAATCGCCGCCTACAAAGCCGTCGAGTCCGTCCAGTCCGGCATGGTGCTGGGTCTCGGCACGGGGTCGACGGCGAGGCACGCGGTGGCTCGAATCGGCGAGCTTCTAAGCCAAGGCAAGCTAACCAACATAATCGGAATCCCCACATCGAAAGTGACCCACGACCAAGCCCTCGCCGCCGGAATCCCGCTCTCCGACCTCGACTCCCACCCCGTCGTCGACCTCGCCATCGACGGCGCCGACGAGGTCGACCCGTATTTGAATCTCGTCAAGGGGCGTGGCGGGTCCCTCCTGAGGGAAAAAATGGTGGAAGGCGCGTGCAAGAGATTCGTCGTCATCGTTGACGACTCCAAATTAGTGACGCATTTGGGAGGGAGTGGGCTCGCCATGCCCGTAGAAATCGTCCCCTTTTGTTGGAAATTCACTGCCTCGAGGCTCCAAAAAATGTTCGAGGATTCCGGTTGCGTCGCAAAGCTTCGAACTTTGGGGGGAATTGACGAACCCTTCGTCACGGACAATGGGAATTACGTCGTGGATTTGTATTTCAAGAGTAGTTTTGGGGATTTGAAGGTCGCTAGTGACGGAATTTTGCGACTTCCGGGTGTGGTGGAACATGGTATGTTTTTGGACATGGCGACAACTGTGATAGTCGCAGGTGAACTTGGCGTGTCGGTGAAGAATAAGTAG 798 0.5614 MAIPYPHFIASEKAAPPSSSLAAVATSPAILTQDDLKKIAAYKAVESVQSGMVLGLGTGSTARHAVARIGELLSQGKLTNIIGIPTSKVTHDQALAAGIPLSDLDSHPVVDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKRFVVIVDDSKLVTHLGGSGLAMPVEIVPFCWKFTASRLQKMFEDSGCVAKLRTLGGIDEPFVTDNGNYVVDLYFKSSFGDLKVASDGILRLPGVVEHGMFLDMATTVIVAGELGVSVKNK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0615 265 CDD RPI_A 36 256 IPR004788 GO:0004751|GO:0009052
Sto11g0615 265 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 265 - -
Sto11g0615 265 Gene3D - 36 257 - -
Sto11g0615 265 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 165 246 - -
Sto11g0615 265 TIGRFAM rpiA: ribose 5-phosphate isomerase A 36 260 IPR004788 GO:0004751|GO:0009052
Sto11g0615 265 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 83 257 IPR004788 GO:0004751|GO:0009052
Sto11g0615 265 SUPERFAMILY NagB/RpiA/CoA transferase-like 32 216 IPR037171 -
Sto11g0615 265 PANTHER ISOMERASE, PUTATIVE-RELATED 1 265 - -
Sto11g0615 265 Hamap Ribose-5-phosphate isomerase A [rpiA]. 33 263 IPR020672 GO:0004751|GO:0009052
Sto11g0615 265 Gene3D - 159 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0615 Sto-Chr11 7236414 7237211 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0615 11 7236414 7237211 Sto11g0615 11 7236414 7237211 ECH