Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0588 ATGGAGGGTGAAGATCATATAGCGCAGTCCTCAATCtcgtcgtcatcatcatcatcttacTACACTATTTTGGGTGTGGATTCGGATTCTTCCATTGATGAAATCAGGCGTGCTTATCGCAAGCTTGCAATGCAATGGCATCCCGACAAGTGTACAAGAACACCTTTCTTACAGGCTGAAGAAGCCAAATGCAAGTTCCAGCAAATTCAGGAAGCTTACCAAGGTGGACACTTCAatGGATTTTCTGATTTTGTGCAAGAAATGGTGTCCTTGATGAGTCAAGTGAGCAGAGAGGAAAAGGAATATAGTATGGAGGAATTGCAGAAGATGGTAATGGAGATGGCAGGAGGATTTGAGAATGCTTCTTCATGGCAATAtgtatcatcttcttcttcttcttcagtggTTCATGAAATTAAATCTCAATGCTCAAAGAGAGCGCGTTTGGACTCAAACTTGAATAAGATGAACTATTCAGGGAGGTCACATTTTCATGACTCTGCTCTTCATAATTTGTATGAAACTAGGGGTTACTGTAACTAG 543 0.372 MEGEDHIAQSSISSSSSSSYYTILGVDSDSSIDEIRRAYRKLAMQWHPDKCTRTPFLQAEEAKCKFQQIQEAYQGGHFNGFSDFVQEMVSLMSQVSREEKEYSMEELQKMVMEMAGGFENASSWQYVSSSSSSSVVHEIKSQCSKRARLDSNLNKMNYSGRSHFHDSALHNLYETRGYCN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0588 180 Gene3D DnaJ domain 2 75 IPR036869 -
Sto11g0588 180 CDD DnaJ 20 74 IPR001623 -
Sto11g0588 180 PRINTS DnaJ domain signature 21 39 IPR001623 -
Sto11g0588 180 PRINTS DnaJ domain signature 39 54 IPR001623 -
Sto11g0588 180 PRINTS DnaJ domain signature 61 81 IPR001623 -
Sto11g0588 180 ProSiteProfiles dnaJ domain profile. 19 106 IPR001623 -
Sto11g0588 180 SUPERFAMILY Chaperone J-domain 17 74 IPR036869 -
Sto11g0588 180 SMART dnaj_3 18 100 IPR001623 -
Sto11g0588 180 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 79 153 - -
Sto11g0588 180 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 74 - -
Sto11g0588 180 PANTHER PUTATIVE, EXPRESSED-RELATED 14 74 - -
Sto11g0588 180 PANTHER PUTATIVE, EXPRESSED-RELATED 79 153 - -
Sto11g0588 180 Pfam DnaJ domain 20 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0588 Sto-Chr11 7008051 7009561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0588 10 74 C2H2 Transcription Factor Family AT1G74250 43.077 2.74e-11 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0588 11 7008051 7009561 Sto11g0588 11 7008051 7009561 ECH