Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0577 TTGCCTGAAGTCACTCTAGCGTCTTTTCAGTGTTTTTGTGGAATGCAGCCGAGAAGTGTTCTAGTCTTTCAAAGTGAGAGAGGATATTGGGACTTTTTGAATAGGAGAATGAGGTGTAGTTATTTCCTCCCatcaaaacttttaaaaatgtcTTCTCGTTTAAAGCATAAATTTGCAGAAAAGTTGTTCATGGAAATTGAGCGACCTGGTACGAGAAGCAGCTCAAAGTTGCATAATAAGGTATCTGTTCTCATGGATTATGACCTTCCTGATGTAGTTAGAAATGGAAAAGGTGAAAGCAAATCTGAAATGAATCTTAAACGTGAAGATGATGAACTGGACATCTCCTTGGTATGTAGAAGATTTCCATCAATCATTTTGGGTAGTGCTTCTCAAGTAGATTTATATGATGGGACCACATCTTACCCTGAAATGTCAGAGATTAAAGCAACCGAAGATTTTGAACAATATTTTTCTGATTCCTCTGAGGCAAGATTGGTGCAAAATACTCTTTCTGAAGCATGGCCTTCTATGTACGCCAATCATTCTAAAAAATTGGATCCTCAGGTCTCCATCAAGGATGATTCTCTTGAGAGAGAGCTGGTGCAGTCACAAGTAAAACTTGCACCCAATGAGTTATTTCTTGACAAATCTATTAGTTGTGTTCCTGGATTAAGTAAGAGGCACTTTCGACAGCTAGAAAACTGTGGCTTTCACACGATGCGGAAATTGCTACACCATTTTCCTCGAACATATGCAGATCTGCAGAATGCGCATTCTCAAATTGCAGATGGGCAGTATTTGATTTTTGTTGGAAATATCATATCGTCAAGGGGAGTCAAAGCtagtttttccttttcatttcttGAGGTGGTAGTGGAATGTCAGGTTGCGGACAGTGAATCTGCTTCTGAACATGTGACTGGCAATGCCATTGGCAGCGGAAAAAAGACAATTTATTTGCATCTGAAGAAATATTTCCGTGGGACGCGTTTTACTGCGAAGCCTTTTCTACAAAGTCTTGCAGGGAAGTATCAAGAAGGAGATCTAGCTTGTGTGAGTGGCAAGGTAAGGACTATGCGTGCTAAAAATCACTATGAGATGAGAGAATATAATGTTGATGTTCTTGAAGATGGAAAAGATATATCCTTATGTGCTAAACAAAGGCCATATCCTATCTACCCTTCAAAAGCAGGTTTAAACCCAGACTTGCTCAGGGACATAATTACAAGAGCTTTACAGGTCTTGCCTGTCGATGTTGATCCAATACCTAAAGAAATCACAGAGCAATTTAGTTTGTTAAGTCTTCACGATGCGTATATCGGGCTCCACAAACCGAAGGATATAATTGAAGCTGATTTGGCTCGCAAGAGGCttatatttgatgaatttttttaccTTCAGTTAGGCCGCTTATTCCAAATGCTTGAAGGACTTGGTACAAAAATAGAAAAGGATGTATTGCTAGATAAGTATAGAAGAACAGAAGATAACACAGCGTGTACAGAGGAATGGTCATGTCTCACCAAGAAGTTTCTGAAGGCTCTTCCATATACCCTAACATCTAGTCAACTGCGTGCTGTTTCAGAAATTATTTGGGATTTGAAAAGGCCAGTTCCTATGAACCGACTACTACAGGGTGATGTTGGATGTGGAAAAACTGTTGTTGCTTTTTTGGCATGCATGGAGGTTGTTGGCTCTGGATATCAAGCAGCTTTCATGGTTCCAACAGAGTTGCTTGCAATTCAGCATTTCGAGCACTTGCTTAATTTGTTGGAGAATTTGGACGAGGGTGTGTGCAAACCCACTGTTGCTTTATTGACAGGTTCGACCCCACCAAAACAATCTCGATTAATTCGGAAGGGTATCCAGACCGGAGAAATCTCAATGATCATAGGAACCCACAGTTTAATAGCAGAAAATGTGGAATTCTTAGCTTTACGCATTGCTGTGGTGGATGAGCAGCACCGTTTTGGTGTGATTCAAAGAGGAAGGTTTAATAGTAAGTTATATTATACTTCTTCAGTTTCTTGGATGGAAGGGGTAGCTTCAGAAGGGTCCCCAAAGAGTGATGCATATATGGCTCCACATGTTCTTGCCATGTCTGCCACTCCCATCCCAAGGACACTTGCTCTAGCTTTATACGGTGATATGTCACTGACACAGATAACTGACTTACCTCCTGGAAGAATTCCTGTTGAAACGTATACCATTGAAGGAAATGACAACGGATTTGAGGATGTCTACAAGATGATGATGGATGAGTTGGAAGATGGAGGAAAAGTATATCTTGTTTACCCAATTATTGAACTCTCTGAACAGCTACCACAGCTTCGTGCAGCTTCTGCAGATTTAGAAGTTATATCAAATCGGTTTCAGGGATACAACTGTGGTTTGTTACATGGAAAAATGAAAAGCGATGAAAAAGAGGAAGCATTGACAAGGTTTAAGACTGGAGAAATGCATATACTACTTTCCACACAAGTAATTGAGATTGGTGTTGATGTTCCAGATGCATCTATGATGGTTGTTATGAATGCTGAGAGATTTGGAATTGCTCAACTGCACCAACTTAGAGGACGAGTTGGACGTGGAACAAGGAAATCTAAATGTATACTAATAGCATCTGCTTCTAGTAGCCTAAATCGATTGAAAGTACTGGAGCAATCATCAGATGGTTTTTACCTTTCCAATATGGACCTTTTATTACGGGGACCTGGTGACTTGCTCGGAAAAAAGCAATCAGGACATCTTCCAGAGTTTCCTATTGCCAGATTGGAAGTTGATGGGAATATTTTACAAGACTCGCACCTTGCTGCAATGGAAATTTTAAGTACTTCCCATGACTTGGAGCAATTCCCTGCACTTAAATTGGAGCTTAGCATGAGACAGCCGCTTAGCCCATTAGGTGATTAA 2916 0.3978 LPEVTLASFQCFCGMQPRSVLVFQSERGYWDFLNRRMRCSYFLPSKLLKMSSRLKHKFAEKLFMEIERPGTRSSSKLHNKVSVLMDYDLPDVVRNGKGESKSEMNLKREDDELDISLVCRRFPSIILGSASQVDLYDGTTSYPEMSEIKATEDFEQYFSDSSEARLVQNTLSEAWPSMYANHSKKLDPQVSIKDDSLERELVQSQVKLAPNELFLDKSISCVPGLSKRHFRQLENCGFHTMRKLLHHFPRTYADLQNAHSQIADGQYLIFVGNIISSRGVKASFSFSFLEVVVECQVADSESASEHVTGNAIGSGKKTIYLHLKKYFRGTRFTAKPFLQSLAGKYQEGDLACVSGKVRTMRAKNHYEMREYNVDVLEDGKDISLCAKQRPYPIYPSKAGLNPDLLRDIITRALQVLPVDVDPIPKEITEQFSLLSLHDAYIGLHKPKDIIEADLARKRLIFDEFFYLQLGRLFQMLEGLGTKIEKDVLLDKYRRTEDNTACTEEWSCLTKKFLKALPYTLTSSQLRAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVVGSGYQAAFMVPTELLAIQHFEHLLNLLENLDEGVCKPTVALLTGSTPPKQSRLIRKGIQTGEISMIIGTHSLIAENVEFLALRIAVVDEQHRFGVIQRGRFNSKLYYTSSVSWMEGVASEGSPKSDAYMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVETYTIEGNDNGFEDVYKMMMDELEDGGKVYLVYPIIELSEQLPQLRAASADLEVISNRFQGYNCGLLHGKMKSDEKEEALTRFKTGEMHILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGTRKSKCILIASASSSLNRLKVLEQSSDGFYLSNMDLLLRGPGDLLGKKQSGHLPEFPIARLEVDGNILQDSHLAAMEILSTSHDLEQFPALKLELSMRQPLSPLGD 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0577 971 Gene3D - 474 724 IPR027417 -
Sto11g0577 971 SUPERFAMILY Nucleic acid-binding proteins 340 416 IPR012340 -
Sto11g0577 971 CDD DEXHc_RecG 459 727 - -
Sto11g0577 971 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 16 971 - -
Sto11g0577 971 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 534 723 IPR014001 -
Sto11g0577 971 Pfam DEAD/DEAH box helicase 542 706 IPR011545 GO:0003676|GO:0005524
Sto11g0577 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 727 IPR027417 -
Sto11g0577 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 727 920 IPR027417 -
Sto11g0577 971 SUPERFAMILY Nucleic acid-binding proteins 214 294 IPR012340 -
Sto11g0577 971 Pfam ATP-dependent DNA helicase RecG, domain 3, C-terminal 891 949 IPR045562 -
Sto11g0577 971 TIGRFAM recG: ATP-dependent DNA helicase RecG 236 937 IPR004609 GO:0003678|GO:0006281|GO:0006310
Sto11g0577 971 Pfam Helicase conserved C-terminal domain 750 865 IPR001650 -
Sto11g0577 971 SMART helicmild6 769 866 IPR001650 -
Sto11g0577 971 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 747 902 IPR001650 -
Sto11g0577 971 SMART ultradead3 516 734 IPR014001 -
Sto11g0577 971 PANTHER ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC 16 971 - -
Sto11g0577 971 Gene3D - 733 904 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0577 Sto-Chr11 6896446 6915221 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0577 11 6896446 6915221 Sto11g0577 11 6896446 6915221 ECH