Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0575 ATGCTTGATAAAGAATTTTTCACTGAGTATGGGGAGGCAAGTCGGTATGAAATTCAAGATGTGGTTGGCAAGGGCAGCTATGGTGTTGTTGCATCTGCAATTGATACCTATAGTGGAGAGAGGGTAGCTATCAAGAAGATGAAAAATGTCTTTGAACATGTTTCTGATGCTACACGCATTCTCCGAGAAATAAAGCTCCTTCGATTGCTAAAACATCCAGATATTGTAGAAATAAAGCACATAATGCTTCCTCCTTGCCGAAGAGAATTCAAAGACATTTATGTGGTGTTTGAGTTGATGGAAACTGATCTTCATGAAGTTATTGAAGTAAACCATGATCTCACTCCTGGACATTACCAATTCTTTTTGTACCAACTTCTTCGAGCTCTAAAGTACATACATTCAGCAAATGTCTTCCACCGAGACTTGAAACCAAAAAACATTCTGGCTAATGCAGACTGCAAACTAAAGATTTGTGATTTTGGACTTGCTCGTGCATCATTTGACAATGCCTCATCTGCCATTTTTTGGACAGATTATGTGGCAACTCGATGGTACCGTGCTCCAGAACTATGTGGCTCATTTTTCTCCAAGTATACACCTGCTGTAGATATCTGGAGCATAGGATGTATTTTTGCAGAAATGCTAACTGGGGAACCTTTATTTCCTGGAAACAATGCGGGGCATCAACTGGATCTCATAACTGACTTGCTTGGAACTCCTCCTGTTGAATCCATTGCTAAGATTCGGAATGAAAAAGCTCGaagatatttaaataacatggtGACCAAACAATCCATTCCTTTCTCAGATAAATTTCCCCATGCAGACCCTATGGCTCTTAGTTTACTTCAGCGCTTGCTTGCCTTTGATCCTAAGCAGCGTCCATCGGCTGAAGAGGCATTAGCCGATCCCTATTTTTATGGGTTGGCAAATCTGGATGAAGAAACATTCATGaaaccaatttcaaaatttgagtTTGAGTTTGAAAGAAGAACATTAACCCAAGATGATATTTTAGAATATCATCCAGAGATGTTACAGGAGTACCTTCAAGGCGCAGAAATGACTAGCTTTATGTATCCCAGTGGACTTGATGGCTTCAAGCAAAAATTTGATGATCTTGAGGAAAATAGTGGGGAAGTTGTAAGAAGCACACTACATTACAGGAAATATGCCTCATTACCCAGTTTTTACAATAGGGAGAGGGTATGTGTAGCCAAGGAAGAGGAAACTGACAGAAAGGATTCATGTAAGGACAAGAATACAGGTTCTGTCATAAATGCAACCCTTCAGAATTCTCCAAGGTCCATGAGCGTCAAAGAACTGGAAGATGCTTGCAGAAATTCATTAACAGTGCAGAACAACTGTTGCAAATCAGCTTGCAGTGGTCATAGACTTGTAAAGAGTGCTAGTATGAGTGCTTCTAGGCAGCCTTGA 1440 0.3951 MLDKEFFTEYGEASRYEIQDVVGKGSYGVVASAIDTYSGERVAIKKMKNVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPCRREFKDIYVVFELMETDLHEVIEVNHDLTPGHYQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFDNASSAIFWTDYVATRWYRAPELCGSFFSKYTPAVDIWSIGCIFAEMLTGEPLFPGNNAGHQLDLITDLLGTPPVESIAKIRNEKARRYLNNMVTKQSIPFSDKFPHADPMALSLLQRLLAFDPKQRPSAEEALADPYFYGLANLDEETFMKPISKFEFEFERRTLTQDDILEYHPEMLQEYLQGAEMTSFMYPSGLDGFKQKFDDLEENSGEVVRSTLHYRKYASLPSFYNRERVCVAKEEETDRKDSCKDKNTGSVINATLQNSPRSMSVKELEDACRNSLTVQNNCCKSACSGHRLVKSASMSASRQP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0575 479 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sto11g0575 479 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 435 - -
Sto11g0575 479 SUPERFAMILY Protein kinase-like (PK-like) 12 310 IPR011009 -
Sto11g0575 479 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Sto11g0575 479 SMART serkin_6 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0575 479 Gene3D Phosphorylase Kinase; domain 1 14 339 - -
Sto11g0575 479 ProSiteProfiles Protein kinase domain profile. 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0575 479 Gene3D Transferase(Phosphotransferase) domain 1 100 334 - -
Sto11g0575 479 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 435 - -
Sto11g0575 479 CDD STKc_TDY_MAPK 15 344 - -
Sto11g0575 479 Pfam Protein kinase domain 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0575 Sto-Chr11 6881705 6886902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0575 2 477 MAP Kinase Gene Family AT3G18040 68.388 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sto11g0575 Pkinase 6.6e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0575 11 6881705 6886902 Sto11g0575 11 6881705 6886902 ECH