Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0568 ATGGCGAGGCGCTTGATTCCGAGCCTCAACCGCGTTCTGATCGAGAAAATCGTGCCGCCGTCGAAGACCACCGCCGGCATTCTACTCCCTGAGAAGACCTCCAAGCTTAATTCAGGGAAGGTGATAGCAGTAGGACCTGGAGCGCGAGACAAGGCCGGAAACTTGATTCCGGTGTCCGTGAAGGAAGGCGACACCGTGCTGTTGCCGGAGTACGGTGGCACGCAAGTCAAGCTCGATGACAAAGAGTATGTTGTCATGacGTTGCATTTGTTTAGGGAAGAGGATATTTTGGGTACTCTCCATGATTGA 309 0.5307 MARRLIPSLNRVLIEKIVPPSKTTAGILLPEKTSKLNSGKVIAVGPGARDKAGNLIPVSVKEGDTVLLPEYGGTQVKLDDKEYVVMTLHLFREEDILGTLHD 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0568 102 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 102 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto11g0568 102 SUPERFAMILY GroES-like 3 101 IPR011032 -
Sto11g0568 102 CDD cpn10 4 100 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto11g0568 102 Pfam Chaperonin 10 Kd subunit 6 98 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto11g0568 102 PANTHER GROES-LIKE FAMILY PROTEIN 1 102 - -
Sto11g0568 102 Gene3D GroES chaperonin 1 102 IPR037124 GO:0006457
Sto11g0568 102 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto11g0568 102 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto11g0568 102 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto11g0568 102 PRINTS 10kDa chaperonin signature 87 100 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto11g0568 102 SMART Cpn10_2 4 100 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0568 Sto-Chr11 6788750 6789870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0568 3 101 Calmodulin-binding Proteins AT5G20720 36.634 2.62e-10 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0568 11 6788750 6789870 Sto11g0568 11 6788750 6789870 ECH