Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0507 ATGGATGGCATTCTGGGTCTTCTCAAACTTCGAATAAAAAAAGGTGTTTCTTTGGCAATTCGTGATACTCGTAGTAGTGACCCTTATGTTGTCGTCACCATGGGCGACCAGatatatatattgatgcagAAATTGAAGACCGGTGTTGTGAAAGATACACGCAATCCTGAGTGGGATGAAGAATTAACACTCTCTATTAGGGATGTTAATACTCCAATTCATCTTGAAGTTTTTGACAAGGACACATTCACAGTGGATGACAAAATGGGGAATGCAGAGATAGACATCAAGCCCTATCTTGAGTGCTTGAAGATGAACTTGACCAACAACCTCTCCAATGGTTGTGTTGTCAAGAGAATTGATGCTGATGGCAAAAACTACCTTGTTGAGGAGAGTTGTTGCATATGGAACAATGGCAAGATCACCCAACAAATGACTCTCGCATTGCGGAATGTCGAGTGTGGTTATGTCGTCGTCGAAATCGAGTGGCGCGAAATCCCGGGTTCTAAGGGTTTATCTGAGGTTGAGCTCTAA 534 0.4176 MDGILGLLKLRIKKGVSLAIRDTRSSDPYVVVTMGDQIYILMQKLKTGVVKDTRNPEWDEELTLSIRDVNTPIHLEVFDKDTFTVDDKMGNAEIDIKPYLECLKMNLTNNLSNGCVVKRIDADGKNYLVEESCCIWNNGKITQQMTLALRNVECGYVVVEIEWREIPGSKGLSEVEL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0507 177 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Sto11g0507 177 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 112 IPR035892 -
Sto11g0507 177 Pfam C2 domain 7 98 IPR000008 -
Sto11g0507 177 Gene3D C2 domain 5 171 IPR035892 -
Sto11g0507 177 SMART C2_3c 7 108 IPR000008 -
Sto11g0507 177 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 170 IPR044562 -
Sto11g0507 177 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0507 Sto-Chr11 6324990 6329225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0507 44 173 C2H2 Transcription Factor Family AT1G70790 56.489 6.03e-46 146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0507 11 6324990 6329225 Sto11g0507 11 6324990 6329225 ECH