Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0493 ATGTTCGCCTCAACAATCCTAACGCCCTCTAAGCTGAAGCTTTCGCATTTCGTCCTATACGCACCAAACAGCGACGTAGAAATCCTTCCTAGCGGAAGCACAAAATACCGAAGAGGAAGAGGCAGAGTCGCACTTTATTCCAAATTAACCCCTCAGGATCGTCGTCTCTTCTTCCCCAGATCACACACTAGACCTGTATTGACCGCAAGGGTCAGTAATGGTGGTGATGGAGCGTTTGATGCTACCTCTCAACATTCGTCTCCTTCTGTATGTGACATTGAAGAATTGAACAGTACCTCTTCTGGCCTTGGCTCTGGTTACGTGGCATTGTTTGTTCGTATGTTAGGCTTAGATCATGATCCTCTTGATAGAGAACAGGCTATAGTTGCTCTATGGAAATATTCACTTGGTGGAAAGAAGTGTATCGATACTTTAATGCAGTTTCCTGGTTGTATTAATCTTACTGTGAATCTCCTCAGATCAGAGTCTACTTCAGCATGTGAAGCAGCTGCAGGCCTTTTGCGATCTCTATCTTCAGTCAATCTATACAGGAATTCTGTAGCAGAGAGTGGAGCGATAGAAGAGATAAATAGATTGCTGAGTCACTCTTCCTTGCCTCCTGAGGTAAAGGAGCAGAGTATATGTACATTGTGGAATTTATCTGTAGATGAGAAGCTCCGCATTAAACTTGCAAAGAGTGATATCCTGCCATTGATTATTAAGTATCTTGATGATGAGGATGTAAAAGTGAAGGAAGCAGCGGGAGGAATATTGGCAAATTTAGCATTGAGCCATGTTAACCACAACATTTTGGTTGAAGCAGGTGCTATACCAAAATTGGCAAAGTTCTTAACTTCTGATTCAGAAGAATCTAAAGTCATTAAAAAGGAAGCAAGGAATGCATTGCAGGAACTTGTTAAGGATGACTATTACAGAATTCTTATTGTTGAGGAAGGTCTGGTTCCTGTGCCATTAGTTGGTACTGATGCCTTTAAGTCATTCACCCCTGGTTTATATTCATGGCCCACATTACCAGATGGTACAGAGATTGAAAAGACTTCTAAACAACCTTCCAAGTTTGGTGCATCAGAATTACTTCTTGGATTAAATATTGACGAGAGAAATGCTAACATAGATGAAGCAAAAATGAATGCAATTGTTGGACGGACACAACAACAATTCCTTGCTCGTATTGGGGCAATAGAATgggaaggaaaaaaagaatCTCATTCTGAAGGCTCTGATGGTCAAAGATTTACTCTTTTACCTTGGATGGATGGTGTTGCCCGCTTGGTACTAATTCTAGAACTAGAAGATAAGTCTGCTATAACAAGAGCTGCAGATTCAATTGCTGATGTATCTATCAATGAACATATGCGCATTGCATTCAAGGAGGCTGGAGCAATTAAGCCTTTGGTTCGGCTTTTGGATTCTGATGACGATGCTGTCAAATTAGCTGTAACTCGAGCTTTGGAGAGGCTGTGTGCTAGCAATGTAGTTTGCCAGATAATTGAAGCTGAGGGTGTGTTAGGTCCTTTAATTAGTATTCTAAAATGCTCAAAGATTTCTGAACCTTTAGCGGAAAAGTCTTTGAATACAATTGCTCGCATATTAGACCCCAGTAAAGAGATGAAATTGAAGTTTTATGATGGACCGGTTAATGGATCTGAGAAATGTTTCAGGAATGATGTACTAGATTCTGCTTTTGTTGGCCGCCTTGTAGAGATTCTGAAATCCTCTACTCCCCATTTACAAGGAAAAGCTGCATTGGTGCTCGAGTTCGTGGCACTGACTGATCCAACTATGGTCTCTCTTATATCAGTGGATATTGAATCCGGTCTCGATGCTGCTTTTCagcaaaaaattttgaaaatttcagATGGGGACTCCGACATAGAAGATCAGCTCTTAGAAGCATACCCCGTTGAAGTCGAAGAAGCCGGTCTAGCAATATCCGCAGCCTCTCGATTAATGACAAGATTACTTGATTCTCAGCAGTTTCGCGACAAAATAAACTCTCCCCATTTCATTGCGTTGCTTCGAGGAATCCTGAAGTCTTGTATTCCTCTCCACAGCAAAGATTGGGTGGCTGCTTGCCTAGTCAAACTGAGCTCTGTCTCCACTCAAACGAGTTCCAACCCAATCAACGCCGAAGTCACGCTTTACGAAACGATCCCGAGACTCATAGAACAGATCAAAACTTCGTTTTCTGCAGAAGCACTGGAATCTGCAGCTGTGGAACTGAACAGAATAGTATCTGAAGGAGTGGTGGATGCTACAAGAGCCATTGTTTCTGAGGGGGCAATATATCCATTGGTGAAGATGATAGAAACAGGAAGTGATAGAGGAGTTGAAGCAGGTTTGGCTATATTGTATAATCTGAGTATGGACAGTGAGAATCATTCAGCAATTGTGAGTGCTGGAGCAGTCCCGGTGCTAAGAAGGATTGTTCTATCACAAAGGCCACAATGGGTAAGGGCACTTCATTTGCTGAGGAGCTTGCCAACATGA 2511 0.4166 MFASTILTPSKLKLSHFVLYAPNSDVEILPSGSTKYRRGRGRVALYSKLTPQDRRLFFPRSHTRPVLTARVSNGGDGAFDATSQHSSPSVCDIEELNSTSSGLGSGYVALFVRMLGLDHDPLDREQAIVALWKYSLGGKKCIDTLMQFPGCINLTVNLLRSESTSACEAAAGLLRSLSSVNLYRNSVAESGAIEEINRLLSHSSLPPEVKEQSICTLWNLSVDEKLRIKLAKSDILPLIIKYLDDEDVKVKEAAGGILANLALSHVNHNILVEAGAIPKLAKFLTSDSEESKVIKKEARNALQELVKDDYYRILIVEEGLVPVPLVGTDAFKSFTPGLYSWPTLPDGTEIEKTSKQPSKFGASELLLGLNIDERNANIDEAKMNAIVGRTQQQFLARIGAIEWEGKKESHSEGSDGQRFTLLPWMDGVARLVLILELEDKSAITRAADSIADVSINEHMRIAFKEAGAIKPLVRLLDSDDDAVKLAVTRALERLCASNVVCQIIEAEGVLGPLISILKCSKISEPLAEKSLNTIARILDPSKEMKLKFYDGPVNGSEKCFRNDVLDSAFVGRLVEILKSSTPHLQGKAALVLEFVALTDPTMVSLISVDIESGLDAAFQQKILKISDGDSDIEDQLLEAYPVEVEEAGLAISAASRLMTRLLDSQQFRDKINSPHFIALLRGILKSCIPLHSKDWVAACLVKLSSVSTQTSSNPINAEVTLYETIPRLIEQIKTSFSAEALESAAVELNRIVSEGVVDATRAIVSEGAIYPLVKMIETGSDRGVEAGLAILYNLSMDSENHSAIVSAGAVPVLRRIVLSQRPQWVRALHLLRSLPT 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0493 836 Pfam Armadillo/beta-catenin-like repeat 456 496 IPR000225 GO:0005515
Sto11g0493 836 SUPERFAMILY ARM repeat 111 325 IPR016024 -
Sto11g0493 836 Gene3D - 639 834 IPR011989 -
Sto11g0493 836 Gene3D - 422 638 IPR011989 -
Sto11g0493 836 Gene3D - 92 327 IPR011989 -
Sto11g0493 836 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 191 224 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 264 307 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 180 222 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 456 496 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 497 539 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 138 179 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 797 833 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 756 796 IPR000225 GO:0005515
Sto11g0493 836 SMART arm_5 223 263 IPR000225 GO:0005515
Sto11g0493 836 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 234 276 IPR000225 GO:0005515
Sto11g0493 836 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 467 494 IPR000225 GO:0005515
Sto11g0493 836 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 767 809 IPR000225 GO:0005515
Sto11g0493 836 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 47 836 - -
Sto11g0493 836 SUPERFAMILY ARM repeat 427 820 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0493 Sto-Chr11 6197381 6204076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0493 150 323 U-box Gene Family AT2G23140 31.034 3.39e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0493 11 6197381 6204076 Sto11g0493 11 6197381 6204076 ECH