Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0491 ATGGGCACGCTTCAGACTTGGAGAAAAGCTTATGGCGCCCTTAAAGATAGTACCAAAGTTGGTCTTGCTCATGTCAATAGCGATTACGCGGATTTGGATGTTGCCATAGTCAAAGCTACGAACCACGTCGAATCTCCTCCTAAGGAGAGGCACCTTAGAAAAATTCTATTTGCCACGTCTGCTATTCGGCCCCGGGCTGATGTTGCTTACTGCATTCATGCACTTGCCCGTCGATTGGCCAAGACGCGAAATTGGACGGTGGCCCTGAAAACACTGATAGTAATCCATAGGCTATTGAGGGAGGGTGACCCTACTTTTAAAGAAGAATTTCTGAATTTCTCACAGAGAGGACGCATTCTCCAACTTTCTAATTTTAAGGATGACTCTAGCCCGATTGCTTGGGATTGCTCTGCCTGGGTACGCACTTATGCATTATTTTTGGAAGAAAGACTGGAATGTTTTCGAGTTTTGAAGTATGACATTGAAGCTGAGCGTCTGCCCAAGCCTGCCCAAGCCCAGGAGAAGTTTATGGATATTTTAGAGGGGTTCCTTTGTTGGATGTCTACAGAGATTGCTTCTAGTATGTGGAGATGGCTGCTTATGGAGGGGTACAGCAGGACAAGGGATTTGGATAGTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAGCAGCTTCTCTATCGGCTTATTGGTTGCAGGCCAGAAGGAGCAGCAGTTAGCAATTATGTGATACAATATGCTCTAGCTCTGGTACTGAAAGAGAGCTTTAAGATTTACTGTGCTGTTAATGATGGAATTATCAATCTTGTCGATAAGTTTTTTGAGATGCCTAGACATGAAGCTATTAAAGCCCTTGACGTCTACAAACGTGCTGGTCAGCAGGCAACAAGTCTCTCTGATTTCTATGAAGTCTGCAAAGGATTGGAACTTGCTAGGAATTTTCAGTTTCCCGTCTTACGGGAGCCTCCACAATCTTTTCTTACAACCATGGAAGAGTACATAAGGGAGGCACCGCGAGTGGTTACAGTTCCAACTGAGCCATTGCTTCAGTTGACTTACAGACAAGAAGACGAAGTTCCAGCAATTGAAGATGGCAAGGTATCTGCTGAAGAGGAGGAGCCATCAGTGCCTGTTGATGATGTTGTCTCTAATTCTGAGACTGATGCTGCCGCTGccactcctcctcctcctccacctcAAAACAATTTTGATGCTGGAGATTTACTGGGGTTGAATGACACTGCACCTGATGCATCCTCAATAGAGGAAAGAAATGCTCTTGCCCTAGCCATAGTACCCACTGAAACCGGCACTACGTCAGCTTTTCAGTCAAGTGCTGCTCAAGcaaatgattttgatccaaCTGGATGGGAGCTTGCCTTGGTTGCCACTCCGAGTAGCAATATTTCTTCTGTCAATGATAGACAATTGGCTGGTGGAATGGACACACTCACTCTTAACAGCTTATACGATGAAGCTGCATACAGATCGCAGCAGCCGGTGTATGGAGCACCGGCCCCAAATCCGTTCGAAGTGGCTGATCCTTTTGCTTTATCAAGCACTGTCCCTCCTCCACCCGGCGTCCAAATGGCAGCAATGGCTCAGCAGCAAGCAAATCCATTCGGTCCTTTCCAACCGCAACCGCAGCCGCAGCATCTGTTAACGAGCCCTGCAAATCCCTTCGGGGATGCAGGATTTGGGGCATTTCCTGTGAACCCAGTTTCTCACCCACAACAAAATAACAACAATCCATTCGGAAGTACAGGCTTGCTATAA 1776 0.4566 MGTLQTWRKAYGALKDSTKVGLAHVNSDYADLDVAIVKATNHVESPPKERHLRKILFATSAIRPRADVAYCIHALARRLAKTRNWTVALKTLIVIHRLLREGDPTFKEEFLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDIEAERLPKPAQAQEKFMDILEGFLCWMSTEIASSMWRWLLMEGYSRTRDLDSEELLEQLPALQQLLYRLIGCRPEGAAVSNYVIQYALALVLKESFKIYCAVNDGIINLVDKFFEMPRHEAIKALDVYKRAGQQATSLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVVTVPTEPLLQLTYRQEDEVPAIEDGKVSAEEEEPSVPVDDVVSNSETDAAAATPPPPPPQNNFDAGDLLGLNDTAPDASSIEERNALALAIVPTETGTTSAFQSSAAQANDFDPTGWELALVATPSSNISSVNDRQLAGGMDTLTLNSLYDEAAYRSQQPVYGAPAPNPFEVADPFALSSTVPPPPGVQMAAMAQQQANPFGPFQPQPQPQHLLTSPANPFGDAGFGAFPVNPVSHPQQNNNNPFGSTGLL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0491 591 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Sto11g0491 591 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Sto11g0491 591 Gene3D - 7 161 IPR008942 -
Sto11g0491 591 MobiDBLite consensus disorder prediction 539 556 - -
Sto11g0491 591 PANTHER CLATHRIN ASSEMBLY PROTEIN 202 572 IPR045192 GO:0048268|GO:0072583
Sto11g0491 591 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 175 IPR045192 GO:0048268|GO:0072583
Sto11g0491 591 MobiDBLite consensus disorder prediction 539 591 - -
Sto11g0491 591 SMART enth_2 30 161 IPR013809 -
Sto11g0491 591 MobiDBLite consensus disorder prediction 360 416 - -
Sto11g0491 591 PANTHER OS05G0549000 PROTEIN 1 175 - -
Sto11g0491 591 PANTHER OS05G0549000 PROTEIN 202 572 - -
Sto11g0491 591 SUPERFAMILY GAT-like domain 205 336 - -
Sto11g0491 591 MobiDBLite consensus disorder prediction 573 591 - -
Sto11g0491 591 Pfam ANTH domain 31 336 IPR011417 GO:0005543
Sto11g0491 591 CDD ANTH_N 32 154 - -
Sto11g0491 591 Gene3D ANTH domain 202 351 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0491 Sto-Chr11 6181571 6188568 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0491 11 6181571 6188568 Sto11g0491 11 6181571 6188568 ECH