Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0487 ATGGCTGCAGTACTATACACAAGACTTTATTGCTCCAAACCCATGGCGATCAGCAGTTTTGTTTCTCTCGAtgggagaaaaagaaaaaacatcaATGTTTCAGTTTCATCCAAGTTCAGTATCTTGAAAACAATCAAATCCTCATCTTCATTCATGGATAGAAACAAGAAATCAAAAGAGCCACAAACATATGAAACTTTGGAGGAAATAGCTGCGAAAGACCGTAAGATCTTCTCCTTTGAAACCTTAGATGCTGCTACAACTAACTTCAGTGACTGCATAGGTGAAGGATGCTTCGGAGCAGTCTACAAGGGGAGGCTGAATAATGGGAAAGAGATTGCAGTGAAGAAGTTGTCAAATGCAACACCACAAGGGAAAAGGGAGTTCCATGAAGAGGCCAACGTGTTGACTGGCTTGCAACATCGCAATGTGGTGAAATTGTTGGGTTATTGCGTTCATAACaatgattatttatttgtttatgagTTTCTTCCATATAGTCTTGACCAGTTTTTATCCAGTAGTAATGAGAAAAAGCAGCTCGATTGGACTGAAAGGTTTGGCATAATCAATGATATAGCTAAGGGTTTGCGTTATCTTCACTTTGACAACAGAGACCGCATTGTCCATCGTGACATAAAGCCCAACAATATCTTGCTTGATCAAGAGTTGAAGGCAAAAATTGCCGACTTTGGCATTAGTCGTTTCTTCCCAGAAGATCGAACCCATGAAACTGTTAGCAAAGCAATTGGATCGCGGGGTTATGTGCCTCCCGAGTATAGGTATCGTAAACATGTGTCAATAAAGTTGGACGTATATAGTTTTGGCGTTCTGATGCTAGAGCTTATTAGTGGACAAAGATACTATGACTATATTCTGTTGTCAAATGATGAAGCTGTCATGGTTGGATTGGCATACAAACTTCACACAAATGGCAGAAGCTTAGAATTTTTAGACCCTACTATAGCAGATCCCACAGTCACAGACACCAAACAAGTGATTAGGTGCATTGAAATAGCTTTGTTATGCGTTCAAGGTGTTTCAACAGCACGCCCCGACATGGAGGATGTTATGTCCATGTTAACAGGGAATCATGGCCCTAGGGAAGCATCATCTATTCTCAAACCTGGAATTTTGGGATATAATGAAGATCGCAAAAAGATGAGCAATGCAGTGTTTGACAGATTGCAGTGA 1194 0.3945 MAAVLYTRLYCSKPMAISSFVSLDGRKRKNINVSVSSKFSILKTIKSSSSFMDRNKKSKEPQTYETLEEIAAKDRKIFSFETLDAATTNFSDCIGEGCFGAVYKGRLNNGKEIAVKKLSNATPQGKREFHEEANVLTGLQHRNVVKLLGYCVHNNDYLFVYEFLPYSLDQFLSSSNEKKQLDWTERFGIINDIAKGLRYLHFDNRDRIVHRDIKPNNILLDQELKAKIADFGISRFFPEDRTHETVSKAIGSRGYVPPEYRYRKHVSIKLDVYSFGVLMLELISGQRYYDYILLSNDEAVMVGLAYKLHTNGRSLEFLDPTIADPTVTDTKQVIRCIEIALLCVQGVSTARPDMEDVMSMLTGNHGPREASSILKPGILGYNEDRKKMSNAVFDRLQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0487 397 Pfam Protein tyrosine and serine/threonine kinase 90 306 IPR001245 GO:0004672|GO:0006468
Sto11g0487 397 ProSiteProfiles Protein kinase domain profile. 88 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0487 397 PANTHER RECEPTOR-LIKE KINASE 56 370 - -
Sto11g0487 397 Gene3D Phosphorylase Kinase; domain 1 47 163 - -
Sto11g0487 397 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Sto11g0487 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Sto11g0487 397 SMART serkin_6 88 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0487 397 CDD STKc_IRAK 94 363 - -
Sto11g0487 397 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 56 370 - -
Sto11g0487 397 Gene3D Transferase(Phosphotransferase) domain 1 166 372 - -
Sto11g0487 397 SUPERFAMILY Protein kinase-like (PK-like) 75 361 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0487 Sto-Chr11 6131415 6136091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0487 54 368 Receptor kinase-like Gene Family AT4G11530 44.410 3.07e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto11g0487 PK_Tyr_Ser-Thr 5.5e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0487 11 6131415 6136091 Sto11g0487 11 6131415 6136091 ECH