Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0478 ATGAAGGTGATAAACCAATTTGTTTCATGTGCTACACTAGTTGTATCTGGTGATGGTCGTTATTTTTCAAAGGAGGCTATTCAGATCATCATTAAAATGTCAGCAGCAAATGGAGTAAGACGTGTTTGGGTTGGTCAAAATGGATTGCTTTCAACTCCTGCTGTATCTGCTGTTATACGAGAAAGAGTTGGGGCTGATGGATCCAAGGCCACTGGTGCATTTATACTGACAGCCAGTCACAATCCTGGTGGCCCTCATGAGGATTTTGGAATTAAATATAACATGGAAAATGGTGGACCAGCTCCAGAGGGAATTACTAACAAGATCTATGAGAACACAACAAAAATTAAGGAATACTTGATTTCTGAAGATCTGCCTGATGTGGATATCGCCGCAATAGGTGTTACAAACTTCACAGGTCCTGAAGGACAATTTGATGTTGAGGTTTTTGATTCAGCAAGTGATTACGTAAAACTAATGAAGTCAATTTTTGATTTTGAGTCTATTAAGAAACTACTGTCTTCGCCCAAATTCACATTCTGTTACGATGCTCTAAATGGCGTTGCTGGAGCTTATGCAAAGCGTATTTTTGTGGAAGAGCTTGGGGCCCAAGAAAGCTCTTTGCTCAATTGTGTACCTAAGGAAGACTTTGGAGGAGGTCATCCAGATCCCAATTTGACATATGCAAAGGAGTTGGTTGAACGCATGGGCTTGGGCAAATCAGCCCAAGGTGAGCCACCAGAGTTTGGTGCTGCTGCTGATGGTGATGCAGATCGTAACATGATACTTGGTAAAAGgTTTTTTGTTACTCCATCAGATTCAGTGGCCATAATTGCCGCAAATGCTGTGGAATCTATACCCTACTTTTCTGGTGGCTTAAAGGGAGTTGCCAGGAAAATCACTATCAGAACAAACATTTACATGCCAACCTCTGCTGCCCTGGATGTTGTAGCCCAACATCTGAAGTTGAAATTTTTTGAGGTCCCCACAGGATGGAAGTTCTTTGGTAATTTGATGGATGCTGGATTATGTTCAGTTTGTGGTGAAGAAAGTTCGGACCATATTCGTGAGAAAGATGGAATATGGGCAGTTTTGGCCTGGATGTCTATACTGGCAcacaaaaataaagataaactTGGTGGAGACAAGCTTGTATCAGTTGAAGACATAGTTCGCCAGCATTGGACTACCTATGGGCGTCATTATTATACTAGATATGATTATGAAaaTGTGGATGCAGGTGCAGCTAAGGAACTGATGGCATATTTGGTGAAACTGCAGTCATCTCTTCCTGAAGTCAATAAGATAATCAAGGGAGTAAGGTCGGATGTGTCAAATGTTGTCCATGCTGATGAATTTGAATACAAAGATCCCGTGGATGGTTCGGTATCATCACATCAGGGCATCCGATATTTGTTCGAGGATGGATCACGATTGGTTTTCCGCCTCTCTGGAACTGGATCAGAAGGTGCGACTATTCGTCTGTATATTGAGCAATATGAGAAGGATTCGTCAAAAACTGGGAGACTTTCACAAGAAGCACTTGCCCCTCtcGTGGAGGTTGCTTTGAAACTTTCAAAGATGCAGGAATTCACCGGTCGATCAGCTCCAACAGTCATTACATGA 1626 0.4176 MKVINQFVSCATLVVSGDGRYFSKEAIQIIIKMSAANGVRRVWVGQNGLLSTPAVSAVIRERVGADGSKATGAFILTASHNPGGPHEDFGIKYNMENGGPAPEGITNKIYENTTKIKEYLISEDLPDVDIAAIGVTNFTGPEGQFDVEVFDSASDYVKLMKSIFDFESIKKLLSSPKFTFCYDALNGVAGAYAKRIFVEELGAQESSLLNCVPKEDFGGGHPDPNLTYAKELVERMGLGKSAQGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVESIPYFSGGLKGVARKITIRTNIYMPTSAALDVVAQHLKLKFFEVPTGWKFFGNLMDAGLCSVCGEESSDHIREKDGIWAVLAWMSILAHKNKDKLGGDKLVSVEDIVRQHWTTYGRHYYTRYDYENVDAGAAKELMAYLVKLQSSLPEVNKIIKGVRSDVSNVVHADEFEYKDPVDGSVSSHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDSSKTGRLSQEALAPLVEVALKLSKMQEFTGRSAPTVIT 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0478 541 PANTHER BNAA09G30060D PROTEIN 8 69 - -
Sto11g0478 541 PANTHER BNAA09G30060D PROTEIN 69 541 - -
Sto11g0478 541 PRINTS Phosphoglucomutase/phosphomannomutase family signature 72 86 IPR005841 GO:0005975|GO:0016868
Sto11g0478 541 PRINTS Phosphoglucomutase/phosphomannomutase family signature 177 196 IPR005841 GO:0005975|GO:0016868
Sto11g0478 541 PRINTS Phosphoglucomutase/phosphomannomutase family signature 213 226 IPR005841 GO:0005975|GO:0016868
Sto11g0478 541 PRINTS Phosphoglucomutase/phosphomannomutase family signature 247 262 IPR005841 GO:0005975|GO:0016868
Sto11g0478 541 SUPERFAMILY Phosphoglucomutase, first 3 domains 255 405 IPR016055 GO:0005975|GO:0016868
Sto11g0478 541 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 73 82 IPR016066 GO:0000287
Sto11g0478 541 Gene3D - 2 162 - -
Sto11g0478 541 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 155 263 IPR005845 GO:0005975
Sto11g0478 541 Gene3D - 163 267 - -
Sto11g0478 541 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 69 541 IPR045244 GO:0004614|GO:0005975
Sto11g0478 541 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 8 69 IPR045244 GO:0004614|GO:0005975
Sto11g0478 541 Gene3D - 381 541 - -
Sto11g0478 541 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 458 513 IPR005843 GO:0016868|GO:0071704
Sto11g0478 541 SUPERFAMILY Phosphoglucomutase, first 3 domains 154 268 IPR016055 GO:0005975|GO:0016868
Sto11g0478 541 SUPERFAMILY Phosphoglucomutase, first 3 domains 11 184 IPR016055 GO:0005975|GO:0016868
Sto11g0478 541 SUPERFAMILY Phosphoglucomutase, C-terminal domain 400 541 IPR036900 GO:0016868|GO:0071704
Sto11g0478 541 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 119 IPR005844 GO:0005975|GO:0016868
Sto11g0478 541 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 272 398 IPR005846 GO:0005975|GO:0016868
Sto11g0478 541 Gene3D - 268 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0478 Sto-Chr11 6037380 6044736 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0478 11 6037380 6044736 Sto11g0478 11 6037380 6044736 ECH