Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0476 ATGCATGGTGGTGAAGCTGAATCATTATCATGCCTCCATACTCCATACCCTCATGTGTGCAATCACTACATGTCCACCAATACACTctcaacttcttcttcttcttcttcctctttctccttCCATGAAATGGCCCTTCAGGTCACCATGGACCAAGCCATTGAGGCTCACAAGCTTGTCTCCACCATGAAAATAATGGACAACAATGACTTCAATGGCGGCGACAACCGTGCCAAGTTAGCTTGGTCAGACTGCTTGGAGCTCTACGAAGATACAGTTTTTCAGTTAAACCGATCGGTCAGTAAGTCAAAAAATCCTGACGATAGGCTCACTTGGCTCAGTGCCGCCACAGCCAACCATCAGACTTGCCAAAATGGGTTCCTTGACTTGAACCTCCAATCTCATCTCAACTACTTCCCAAACATGCTTGGAAACTTCTCCAAATTGCTTAGTAATTCCTTGGCCATTACTATGGCCATGTCaatatcatcatcaccatcattatcatcttctttCAAGAgagtcaataataataataatggtggtggtgggagGAAGTTGCTAGGCAGTTATCCTGAGTGGGTTTTGGAGTCGGATCGGAAGTTGATAGAGGCAGCGCCTGGGACACCGGGGCCAGATGTGGTGGTGGCGAAGGACGGGAGTGGGAACTACAAGAGTATAGCGGAGGGGGTGGCGGCGGCAGCGAAGATGGGTGGCGGTGGAGGGAGGAGAGTGGTGGTGCATGTGAAGGGCGGTGTGTATGCAGAGAACGTAGAGATTAAAAGGACAATGAAGAATTTGATGATAGTTGGAGATGGAATTGGTGTTACCATTGTTACGGGTAGCAAGAGTGCTGCACAAACCACCACTTTCTCTTCTGCTACATTTGCTGTTTCCGGCGACAACTTCATCGCCCGCGACATAACCTTCGAGAACACCGCCGGGCCGGCGAAGCACCAGGCGGTGGCTCTACGCTGCGGCGCCGACCACGCCGTATTCCACCGCTGCAGCTTCCTTGGCTACCAAGACACCTTGTACGTCTACTCCCAGCGCCAATTCTACCGCGACTGCGACATCCACGGCACCGTCGACTTCATCTTCGGCGACGCCGCCGCAATACTCCAGAACTGCAACATCAACGCCAGGAAGCCCATGGGCGGGCAACAGAACACGGTGACGGCGCATGGGAGGTCCGACCCGAATGAGAACACGGGTATCATCATCCAAAACTGCCGGGTTAACGGGGCGCCCGGCACCAACAACTTCCTGGGGCGGCCGTGGAGGGAGTACGCGAGGACGGTGGTGATGGCGAGCGAGCTCGGGGGCATCCATCCGGCAGGGTGGTTGGAGTGGAGCGGAAGCTTTGCTCTGAAGACTCTCTACTACGCGGAGTATATGAATACCGGAGGCGGTGCCGCGACCGGAGGGAGGGTGAAGTGGCCGGGGTTTCACGTGCTGAGGAGCCCGGCCGAGGTGAGCGAGTTCTCGGTGGGGAATTTCTTGGGCGGGGAGTCGTGGATTCCCGGCGCCAACGTGCCGTTCGACGCCGGGTTGTGA 1557 0.5202 MHGGEAESLSCLHTPYPHVCNHYMSTNTLSTSSSSSSSFSFHEMALQVTMDQAIEAHKLVSTMKIMDNNDFNGGDNRAKLAWSDCLELYEDTVFQLNRSVSKSKNPDDRLTWLSAATANHQTCQNGFLDLNLQSHLNYFPNMLGNFSKLLSNSLAITMAMSISSSPSLSSSFKRVNNNNNGGGGRKLLGSYPEWVLESDRKLIEAAPGTPGPDVVVAKDGSGNYKSIAEGVAAAAKMGGGGGRRVVVHVKGGVYAENVEIKRTMKNLMIVGDGIGVTIVTGSKSAAQTTTFSSATFAVSGDNFIARDITFENTAGPAKHQAVALRCGADHAVFHRCSFLGYQDTLYVYSQRQFYRDCDIHGTVDFIFGDAAAILQNCNINARKPMGGQQNTVTAHGRSDPNENTGIIIQNCRVNGAPGTNNFLGRPWREYARTVVMASELGGIHPAGWLEWSGSFALKTLYYAEYMNTGGGAATGGRVKWPGFHVLRSPAEVSEFSVGNFLGGESWIPGANVPFDAGL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0476 518 Gene3D - 209 518 IPR012334 -
Sto11g0476 518 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 157 IPR006501 GO:0004857
Sto11g0476 518 Pfam Pectinesterase 213 503 IPR000070 GO:0030599|GO:0042545
Sto11g0476 518 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 8 517 - -
Sto11g0476 518 PANTHER PECTINESTERASE 8 517 - -
Sto11g0476 518 SUPERFAMILY Pectin lyase-like 209 517 IPR011050 -
Sto11g0476 518 CDD PMEI-like_3 9 160 - -
Sto11g0476 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 157 IPR035513 -
Sto11g0476 518 SMART PMEI_2 2 156 IPR006501 GO:0004857
Sto11g0476 518 ProSitePatterns Pectinesterase signature 2. 359 368 IPR033131 -
Sto11g0476 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 8 160 IPR035513 -
Sto11g0476 518 Pfam Plant invertase/pectin methylesterase inhibitor 10 156 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0476 Sto-Chr11 6021934 6024467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0476 10 518 Carbohydrate Esterase AT1G23200 52.662 0.0 525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0476 11 6021934 6024467 Sto11g0476 11 6021934 6024467 ECH