Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2515 ATGCCGGCGACGTGCGCCGCCAGAATCTTCCAGCTAACCCGAGAGCTCGGGCATAAATCCGACGGAGAGACGATCCGGTGGTTACTCGAGCACGCCGAACCGGCAATCATAGAAGCCACCGGCACGGGAACCATCCCCGCAATCGCCGTCTCCGTCGGCGGCACCCTGAAGATCCCGACCTCCTCTCCGGCGAGACCCGACGGAGAAGAAACCCCTAGAAAACGCCGAAGAAGAGCGTCAAACAGCGAGTTCATCGACATGAACGATCCAATCTCAATCTCCTCAGGCCTAGCTCCGGTCACCCCAACGCCATACTCCGCCGTGGGGACTCCCGGCGTTTCTGGGTCAGCGAATCAGCCCCAATACTGGGCGATTCCAGCGAGCGCGACTCCGTTTTTCAACGTTCAAGCGAGGCCCATTTCGAACTTCGTCTCGGCGATGATGCAACCCAGCGAGCAGCAATTAGTGTCTTCGAATTCTTCGTCTACGATGGCTCCGAGCTTGAGCTCAGGGACGACGAGTACGAGTGTGAGTGCtgctgctgctactactactacggCCACTCAAATGCTTAGGGATTTCTCTTTGGAAATTTATGATAAGAAGGAACTGCAATTTTTGGGTCGGTCTTCGGATTCTGAACCGCCCACTTCAAAGCCTTGA 663 0.5445 MPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSPARPDGEETPRKRRRRASNSEFIDMNDPISISSGLAPVTPTPYSAVGTPGVSGSANQPQYWAIPASATPFFNVQARPISNFVSAMMQPSEQQLVSSNSSSTMAPSLSSGTTSTSVSAAAATTTTATQMLRDFSLEIYDKKELQFLGRSSDSEPPTSKP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2515 220 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 1 214 - -
Sto10g2515 220 ProSiteProfiles TCP domain profile. 1 39 IPR017887 -
Sto10g2515 220 MobiDBLite consensus disorder prediction 67 83 - -
Sto10g2515 220 MobiDBLite consensus disorder prediction 56 96 - -
Sto10g2515 220 MobiDBLite consensus disorder prediction 155 182 - -
Sto10g2515 220 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 214 IPR005333 GO:0003700
Sto10g2515 220 Pfam TCP family transcription factor 1 55 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2515 Sto-Chr10 35412681 35413418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2515 1 207 TCP Transcription Factor Family AT5G51910 52.361 8.51e-64 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto10g2515 TCP 4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2515 - - ccaj:109793344 276.174