Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0306 ATGAAGAAGATACAGATATCACTTATGGATTTGTTctgtgaagaagatgaagagctAAACTCTCTCTTCTCCAAAgaacagaaagaaaaagaagcctTCAGTTTCCATTTGGATTCTTGCCTCTTAATGGCTCGTCGTGAAGCAGTGGAATGGATGCTTCGAGTGAATACCCATTATGGCTTCTCTGCTTTAACTTCCATCCTCGCCATAAATTACTTGGACAGATTCCTCTTCAGCTTCAAGTTTCAGAGAGAGAAGCCATGGATGATCCAGCTCGTGGCTGTCACGTGCCTCTCTTTAGCAGCAAAAGTTGAAGAGACTCATGTCCCTCTTCTTCTAGACCTCCAAgttGAAGATTCCAAGTATGTGTTTGAGGCGAAGACGATTCAGAGAATGGAGCTTCTGGTTCTTTCCACACTGAAATGGAAGATGCATCCAGTGACTCCATTATCATTCTTAGATCACATCATAAGGAGACTTGGGTTGAAATCCCATCTTCATTGGGAATTTCTCAAGCGATGTGAAAATCTTCTTCTGTCTACACTCTCagATTCAAGATTGGTGGGTTGGCTTCCTTCTGTGTTGGCCACTGCAATAATGCTGCATGTTATAGAGCAGATGGAGCACAACGATCATGGGACAGAGTATAAGAAACAACTTCTCAGTCTTCTTAAAATTAGCAAGGAGAAAGTAGAAGAGTGTTACGAAGGAATTGTTGAAGTGTGTAGCAAAAAAGAAGGGTATGATAAGAAGAGAAAGTATGAGAAAATCCCAGAGAGTCCAAATGCTGTATTTGGGTCTGAATCTGATGCTTCAAACTCCAATCATCATTCATGGACAGCATTAggatcttcatcttcatcttcatctttgtGTTCATCATCGCCACAACCTCTCTTCAAGAAGACCAAACTTCATCATCAACAACAATGTATGAACTTGTTACCACTCAATATGGTGGCTGTCACAATTGTTGCCTCCTCtccttaa 990 0.3798 MKKIQISLMDLFCEEDEELNSLFSKEQKEKEAFSFHLDSCLLMARREAVEWMLRVNTHYGFSALTSILAINYLDRFLFSFKFQREKPWMIQLVAVTCLSLAAKVEETHVPLLLDLQVEDSKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKSHLHWEFLKRCENLLLSTLSDSRLVGWLPSVLATAIMLHVIEQMEHNDHGTEYKKQLLSLLKISKEKVEECYEGIVEVCSKKEGYDKKRKYEKIPESPNAVFGSESDASNSNHHSWTALGSSSSSSSLCSSSPQPLFKKTKLHHQQQCMNLLPLNMVAVTIVASSP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0306 329 PANTHER CYCLIN D3.1 PROTEIN 7 290 - -
Sto10g0306 329 CDD CYCLIN 45 137 IPR013763 -
Sto10g0306 329 Pfam Cyclin, C-terminal domain 147 257 IPR004367 -
Sto10g0306 329 SMART cyclin_7 50 138 IPR013763 -
Sto10g0306 329 Gene3D - 146 237 - -
Sto10g0306 329 SUPERFAMILY Cyclin-like 16 145 IPR036915 -
Sto10g0306 329 Gene3D - 37 145 - -
Sto10g0306 329 PANTHER CYCLINS 7 290 IPR039361 -
Sto10g0306 329 SMART Cyclin_C_2 147 272 IPR004367 -
Sto10g0306 329 SUPERFAMILY Cyclin-like 129 243 IPR036915 -
Sto10g0306 329 Pfam Cyclin, N-terminal domain 43 144 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0306 Sto-Chr10 2420563 2422455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0306 10 253 Core Cell Cycle Gene Families AT4G34160 59.200 5.40e-97 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0306 10 2420563 2422455 Sto10g0306 10 2420563 2422455 ECH
Sto2g0560 2 4768614 4769994 Sto10g0306 10 2420563 2422455 ECH
Sto5g1154 5 7713826 7715209 Sto10g0306 10 2420563 2422455 ECH