Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0103 ATGGCTAGGGTTAGTGCAAGCAGATCTTTGTTTCCCTCTTTGCTCTTGATTTCTTCCCTTCTATTGGCCTTTCAAACCCATGTCTTCTCTAGGACAGTAGCAAAACCTCCCATTGTGAAGGGATTATCATGGAATTACTATTTTCTAGAATGTCCCAAGCTTGAAAGGATTATAAGGAAGCATTTGGAGGATGTCTTCAAGAAGGACAATGGACAAGCTCCTGGCCTACTTCGACTCTTCTTCCATGACTGCTTTGCTAATGGATGTGATGCGTCTATATTGTTGAATGGGGTTGGAGAAGATGATGAAAAGCAACACCCTGCTAACTTTGGCTTAAGGCAAGAGGCCATTCAGACCATTGAAAACCTTCGGGTTCTTATTTACAAGCAGTGCCTACCAGTTGTCTCGTGCTCAGACATCCTTGTTACTGCGGCGCGCGAAGCTGTTCGCCAACTAGGAGGCCCCGATTTTGACGTGCCACTGGGAAGAAAAGACAGCCTAACATTCAACGCATCCGCACCGGACAACCTTCCCCCACCGTTCTTCCGAACCGACGAGCTCCTCGAAGTCTTCGGAGCCAGAAACTTCGACGCCTCAGAAGTGGTCGCTCTCTCGGGTGCCCACACTTACGGTCGCGCCCACTGTCCCTCACTGTTCAACAGAACCACAGAAACGGACCCACCCATAGACCCAGCCTTCAAGGACAAACTGATCGCCACGTGTCCCAACGATGAATCCCCCAACACCGTCGATTTGGACGTGAGAACCCCCACCAAGTTCGACAACATGTATTACATCAACCTCTTGAACCGCCAGGGCGTGTTCACCTCGGACCAGGACCTGGCGAGCCACCCCAAAACTAAGGAGGTAGTGAACCGATTCGCTTCCGACCAGAAACAGTTTTTTAACACGTTTGCGGATGCTTTTGTGAAGGTGAGCCAGATCAACGTGATAACTGATCGTCAAGGGAAAGGGGAAATTCGCGATAAGTGCTTTTCTCCGAATAAGAGGAAATCTTCCGTGGCGTCCGTGGCGGAAGAAGTGGTGGAATTGGCTGAGAACATCTAA 1068 0.4972 MARVSASRSLFPSLLLISSLLLAFQTHVFSRTVAKPPIVKGLSWNYYFLECPKLERIIRKHLEDVFKKDNGQAPGLLRLFFHDCFANGCDASILLNGVGEDDEKQHPANFGLRQEAIQTIENLRVLIYKQCLPVVSCSDILVTAAREAVRQLGGPDFDVPLGRKDSLTFNASAPDNLPPPFFRTDELLEVFGARNFDASEVVALSGAHTYGRAHCPSLFNRTTETDPPIDPAFKDKLIATCPNDESPNTVDLDVRTPTKFDNMYYINLLNRQGVFTSDQDLASHPKTKEVVNRFASDQKQFFNTFADAFVKVSQINVITDRQGKGEIRDKCFSPNKRKSSVASVAEEVVELAENI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0103 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Ssu9g0103 355 CDD secretory_peroxidase 41 331 IPR033905 GO:0004601|GO:0042744
Ssu9g0103 355 Gene3D - 45 331 - -
Ssu9g0103 355 SUPERFAMILY Heme-dependent peroxidases 14 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PANTHER PEROXIDASE FAMILY PROTEIN 31 339 - -
Ssu9g0103 355 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Ssu9g0103 355 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 Gene3D Peroxidase, domain 2 179 313 - -
Ssu9g0103 355 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 ProSiteProfiles Plant heme peroxidase family profile. 41 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 PANTHER PEROXIDASE 25-RELATED 31 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g0103 355 Pfam Peroxidase 59 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0103 Ssu-Chr9 8316278 8319899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0103 1 352 Peroxidase AT1G71695 47.645 1.31e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0103 K00430 - gmx:100795412 518.85