Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2069 ATGGGGCTTTGTAATGATTTGGATATGATATCTGCTTCCCTTGGAGAAGGGGATATTACCGCCCGGCAAACTGGTCCAGAGGCGATAGTTGAGGATGATTTTAGTGATGAAGAAATTGAGGTAGATGAGCTCGAGCAAAGGATGTGGAGGGACAGAATGCGTCTCAAGCGATTGAAGGAACAGAGTAAATCTAAGGAAGGAATTGATGCAGTGAAGCAGAGGCAGTCCCAAGAACAGGCAAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGTAAGGCCCAAGGATTTGTTTATGGGATAATTCCTGAGAAGGGAAAACCTGTGACTGGGGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTCAGGTTTGATCGTAATGGTCCTGCTGCCATAGCCAAGTATCAAGCTGACAATGCTATCCCGGGGAAGAATGATGGATGCAATTCCATCGGTCCAACTCCGCACACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAGCACTGTGATCCTCCTCAGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCGCCATGGTGGCCCACAGGAAGCGAAGAGTGGTGGCCCCAAATTGGTTTACCTAAAGATCAAAGTCTTCCTCCTTACAAGAAGCCTCATGACCTGAAGAAGGCTTGGAAAGTTGGTGTCCTGACTGCAGTTATCAAGCACATGTCTCCTGACATTGCCAAAATTCGAAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACTGCCAAGGAAAGTGCAACCTGGCTTGCAATCATCAATCAAGAGGAGGCCTTGGCACGAGAGCTTTACCCTGATTATATCCCCCCATTAGCCTCAGCTGGAGGAAGTGGATCATTGGTCATCAATGATAGCAATGAGTATGATGTTGAAGGGGGTGAGGatgggcctaactttgatgtgGAAGACCCGAAACGTGAGAATCTTCACACGTCCAATCTCGGGATGGAGAGAATGAGGGAAAGTCTGCCAGTTCAGCAGCCCTCTTTTTCAATCAAGGGAGAGGCTGTTACAAATTTGGATTTCATTCGGAAGAGGAAGGTCTCTAATGACTTTAACATGATGGATCTGAAAATTTACACATGTGAACACCCTCAGTGCCCTTACAGTCAAGTTTGCCTTGGTTTCCCTGACAGAATTTCTAGGGACAATCATCAATTGACTTGTGCTTATAGAGGTACTTCTTCAGATTTTGGGGGTCCAAATTTTCATGTTAATGAGGTAAAGCCGGTCATATTCCCCCAGTCCTTTGTTCAACCCAAATCTACCGCTCAGTCCATTAATATGGTTCCGCCCGTAATTGATCTGACTGGACTTGAAGTTTCAGAGGATGGCCAGAAAATGATTGGTGACCTTATGACTAACTATGATACAAATGTTCAAGGCAACAAGAACATAAGTTCCTGTAATTGCGTAGCTGCAGAAAGTTCAATCCCTCCTCAGCATGGCatgcagcagcagcagcagcaagcAGCAACAGGACAACTTCTTTCGCAGGTCAAGGAATCACTATGGAAGGAGGATATGCAAGGAGTAGGGATGGATGCTCTTCAGAAACAGCCAGATGTTTCTATATGGTACCAGTGA 1683 0.4468 MGLCNDLDMISASLGEGDITARQTGPEAIVEDDFSDEEIEVDELEQRMWRDRMRLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGSEEWWPQIGLPKDQSLPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASAGGSGSLVINDSNEYDVEGGEDGPNFDVEDPKRENLHTSNLGMERMRESLPVQQPSFSIKGEAVTNLDFIRKRKVSNDFNMMDLKIYTCEHPQCPYSQVCLGFPDRISRDNHQLTCAYRGTSSDFGGPNFHVNEVKPVIFPQSFVQPKSTAQSINMVPPVIDLTGLEVSEDGQKMIGDLMTNYDTNVQGNKNISSCNCVAAESSIPPQHGMQQQQQQAATGQLLSQVKESLWKEDMQGVGMDALQKQPDVSIWYQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2069 560 Gene3D - 74 151 IPR023278 GO:0003700|GO:0005634
Ssu8g2069 560 Coils Coil 27 61 - -
Ssu8g2069 560 Gene3D - 166 299 IPR023278 GO:0003700|GO:0005634
Ssu8g2069 560 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 524 IPR006957 GO:0005634
Ssu8g2069 560 MobiDBLite consensus disorder prediction 59 85 - -
Ssu8g2069 560 SUPERFAMILY DNA-binding domain of EIN3-like 168 292 IPR023278 GO:0003700|GO:0005634
Ssu8g2069 560 Pfam Ethylene insensitive 3 42 289 IPR006957 GO:0005634
Ssu8g2069 560 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2069 Ssu-Chr8 54071618 54073476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2069 1 521 EIL Transcription Factor Family AT3G20770 65.844 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Ssu8g2069 EIN3 3e-130 No_clan