Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1781 ATGGATTGGTACTACGGGAGCGGCATCAATGATTATCTTGTTCCTAAAGACCAGGATTTATTGGACAGGCATCATTCACCAGATTATTGGTCAAACTGGGGAATAAGTGCAACTGAAGGTTTTAATTCACCtaaaaatttttttatcatggaTTTCTTTGAAGAAAGATTCAATAGTCAAATTGAGCTTGAATCATCTCTGCATGATAAAGATCAATCTACCAGTTCAAGTGTATGTGGAGGATTGCCTGGGCAATCTTTTCAACAGACAGCACTTTCATGTGATCAACCTAATTACCAGCTTCAAGATCTACCAAGATTCGAACTGAATGACATTTTCTTGGATTCTGTATCTGAAGATCTACCATGTATTGATGTTGGAAACGTAGACAAATCCATCAACATTTCTCCTGAAAACCAGTGCAGCAGTACACCTGGAAATTTGCAGAAAGATATTACAGCTTCAAAATCTGTTTCAAGCAACTCAGAATCTAAGGATTGCCTGGATATAGAGgcatCATCGGCCAAGGTCTTGGACTCTTTTGAGCAGTGCAGCAGAGATGATGTCATGTGTCAGCAGTCATTGCTTGATGAATTCATCCTAAAGGATCTTGAGATGACAATTGGACAGTTCACTGAGAGGGCCCGTATTTGCTTTCGAGATGCCTTGTACCGTCTTGCTAGAAACACTGAACAACAGCATGTAATAGTGGACCAGGATGAAGATCTTAACATACAAAAAGCAATGCCACATGCAGATCACAATGAAACAGTGAGGAGGTCTCAGGACAAGAAACCAATGGAATCAGCGACCAACAATATTGACAGAATAATTGCAAATCTCATGTTCAAGAGCATGGAGTTTAACATACATGATCCTTCACTTACATCATCAATAAACTCCATGCAACAAGTTATTGGAAGTAATGGTCTACACGCAAACAGCTCAAAAGCCTTAAATATGGGAGAAAAGTCTTGCTATTCCCATCCCGAAAAATTATCAGCAAAAGTCGAGATTCCAAGGTTTGGACTTAGTAACCAAGAAAGGGACACAGGTTCATACATTGCATGTGAAGATCCTACAAAGAAATCTTTCATGATAGGGTCTGGTTAA 1113 0.3881 MDWYYGSGINDYLVPKDQDLLDRHHSPDYWSNWGISATEGFNSPKNFFIMDFFEERFNSQIELESSLHDKDQSTSSSVCGGLPGQSFQQTALSCDQPNYQLQDLPRFELNDIFLDSVSEDLPCIDVGNVDKSINISPENQCSSTPGNLQKDITASKSVSSNSESKDCLDIEASSAKVLDSFEQCSRDDVMCQQSLLDEFILKDLEMTIGQFTERARICFRDALYRLARNTEQQHVIVDQDEDLNIQKAMPHADHNETVRRSQDKKPMESATNNIDRIIANLMFKSMEFNIHDPSLTSSINSMQQVIGSNGLHANSSKALNMGEKSCYSHPEKLSAKVEIPRFGLSNQERDTGSYIACEDPTKKSFMIGSG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1781 370 PANTHER PROTEIN LNK1 1 149 IPR039928 GO:0006355|GO:0007623
Ssu8g1781 370 PANTHER PROTEIN LNK1 148 343 IPR039928 GO:0006355|GO:0007623
Ssu8g1781 370 PANTHER PROTEIN LNK4 1 149 - -
Ssu8g1781 370 PANTHER PROTEIN LNK4 148 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1781 Ssu-Chr8 45602125 45605068 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1781 8 45602125 45605068 Ssu8g1781 8 45602125 45605068 ECH
Ssu8g1781 8 45602125 45605068 Ssu2g0279 2 17403165 17405122 PCT