Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1522 ATGATGGCCTTTCGTTTTCAAGTTTGGCAGCAAAAGCCAATAGCCGCATGGCCTGTGCCCAAGTTGTTTCTCTTTCTTGGGGGTAATTTAGGTTGCCAGGGGTTTGTTCTGGCTTTGTGCATTGGACAACCAGCAGAGGATCAGTTTCATTGTCCAACAAAAAGGGTGGGAAAAATGAAGTATGTGTTGGTGACAGGGGGTGTTGTGAGTGGACTTGGGAAGGGAGTCACTGCCAGCAGTATTGGGCTGCTCCTCAAGGCCTGTGGTCTTAGAGTTACCTCTATCAAGATtgATCCCTACCTGAACACTGATGCTGGAACAATGTCTCCTTTTGAGCATGGGGAGGTTTTTGTCTTAGATGATGGTGGTgagGTTGACCTTGACCTCGGAAACTATGAACGTTTCTTGGACATCAAATTAACTCGCGACAATAATATCACCACTGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTACAGGTCGTTCCACATATAACAGATGCCATCCAAGAGTGGATAGAACGTGTAGCAAAGATACCAGTTGATGGGAAAGAAGGGCCAGCTGATGTCTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAATCCATGCCTTTTATTGAAGCACTAGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCATGTCAGCCTGGTTCCTATTCTCAATGTTGTTGGTGAAGCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGCAGTTCGAAGGAACTTGATGACAATGTCAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAACATACTTACTCTCCACGATGTTCCAAATATTTGGCACATTCCTTTGCTATTGaaaGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACTTGCTAGGTGTTGCTGCAGATCCTAATTTGAAGGTGTGGACTGCAAGGACAAAATTTTATGACAGATGTCATGAACCTGTCAGAATTGCGATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTTCTGCTGCTCGAAAACGTAAACTTATTGTGGACTGGGTTCCAGCTGGCGATCTTGAAGATGTTACTTATAAAGAGCATCCTGAGGCATATAAAGCTGCTTGGAATCTTTTAAAGGGTGCTAATGGGGTTCTAGTTCCAGGAGGTTTTGGTGACAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAACAAAATGTTCCGTTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTGCACGATCTGTTCTCAGTCTGCGTGATGCTACTAGCACAGAATTTGATCCTGAAACCAAGACCCCTTGTGTCATATTCATGCCAGAAGGCTCAAAGACTCATATGGGGGGAACTATGCGACTTGGTTCAAGAAGAACTTACTTTGAAGTTGCTGACTGCAAATCTGCAAAATTGTATGGCAATGTAAGCTTTATTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGACATGATATCACAACTAGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGATGATACTGGGAGGCGCATGGAGATAGTTGAATTGCCTGGCCATCCTTTTTTTATTGGTGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGGAAACCTTCCCCACTCTTCTCAGGATTAATAGCAGCAGCAAGTGAACCAAAGAGGACAGTTCTGGTGCCAAGTAGTAATGGTCACACCAAGTTAACTAATGGAATATGCAATGGACACTCACCAAAACTGAAAGCACACCAAAAGGGAAATGGCTTCAAAGCATCCAATGGTTCCTTAAATGGTGTATATAATACCAATGGCAATGGTGTGTATGTGGATGGTAGTTGTTAG 2004 0.4356 MMAFRFQVWQQKPIAAWPVPKLFLFLGGNLGCQGFVLALCIGQPAEDQFHCPTKRVGKMKYVLVTGGVVSGLGKGVTASSIGLLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILNVVGEAKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAADPNLKVWTARTKFYDRCHEPVRIAMVGKYTGLSDAYLSVLKALLHASAARKRKLIVDWVPAGDLEDVTYKEHPEAYKAAWNLLKGANGVLVPGGFGDRGVQGKILAAKYAREQNVPFLGICLGMQIAVIEFARSVLSLRDATSTEFDPETKTPCVIFMPEGSKTHMGGTMRLGSRRTYFEVADCKSAKLYGNVSFIDERHRHRYEVNPDMISQLESAGLSFVGKDDTGRRMEIVELPGHPFFIGVQFHPEFKSRPGKPSPLFSGLIAAASEPKRTVLVPSSNGHTKLTNGICNGHSPKLKAHQKGNGFKASNGSLNGVYNTNGNGVYVDGSC 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1522 667 Hamap CTP synthase [pyrG]. 59 608 IPR004468 GO:0003883|GO:0006221
Ssu8g1522 667 PANTHER CTP SYNTHASE 59 633 IPR004468 GO:0003883|GO:0006221
Ssu8g1522 667 Pfam CTP synthase N-terminus 60 330 IPR017456 GO:0003883|GO:0006221
Ssu8g1522 667 TIGRFAM PyrG: CTP synthase 58 603 IPR004468 GO:0003883|GO:0006221
Ssu8g1522 667 Pfam Glutamine amidotransferase class-I 367 602 IPR017926 -
Ssu8g1522 667 CDD GATase1_CTP_Synthase 356 601 IPR033828 GO:0003883|GO:0006241
Ssu8g1522 667 Gene3D - 353 616 IPR029062 -
Ssu8g1522 667 PANTHER CTP SYNTHASE 59 633 - -
Ssu8g1522 667 CDD CTPS_N 60 326 IPR017456 GO:0003883|GO:0006221
Ssu8g1522 667 Gene3D - 52 349 IPR027417 -
Ssu8g1522 667 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 357 610 - -
Ssu8g1522 667 SUPERFAMILY Class I glutamine amidotransferase-like 355 606 IPR029062 -
Ssu8g1522 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1522 Ssu-Chr8 31660459 31670745 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0452 2 26313617 26319037 Ssu8g1522 8 31660459 31670745 PCT