Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1507 ATGTGCAGCTCCAAGGCCAAAGTGACTGTAGGCATAGAAGTCGTcgctgccgccaccaccaccactaccacacCCTTAGTGGCCAGAATCAATGGGAGGCCAGTCCTTCAACCAACTTGTAACCGTGTTCCAAACCTTGAAAGGAggaattcaattaagaaaatgCCACCAAAGTCACTTTCTCCACCATCACCACCGCTTCCAAGCAAGACCTCATTGACACCCCCAGTTTCTCCAAAGTCAAAGTCCCCAAGGCTTCCTGCAATAAAGAGAGGCAATGACAACAATGGACTGAACTCAAGTTATGAGAAGATTGCAATCCCAAGAAGCTCCACAAAAGCTCCAACTTTGGAGAGAAAAAAGTCCAAGAGCTTCAAGGAAGGGTCCTGTGTATCAGCTTCTATAGAGGCTTCATTGAGTTACTCTTCCTCTTTGATCACTGACTCCCCAGGGAGCATAGCTGCTGTGAGGAGGGAACAGATGGCACTGCAGCAAGCACAAAGGAAAATGAAGATTGCCCATTATGGAAGATCAAAGTCTGCAAAGTTTGAAAGAGTTGTTCCTCTTGATCCCTCAACCACTAGTCTTACATCAAAGACAACTGAGGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCCATCTATATTGCTTATCATGATGAGGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTGTTTGAACTTTTAGTTTTAAGCGGTGCTCAAGTTGGATCTGATTGGACCTCAACCTTGAAGAAACGCCTAGATTTCAGgGCTGCATTTTCAGAATTTGATGCAGAAACTGTGGCCAACTTGACTGATAAGCAAATGATGTCTATTAGTTCTGAATATGGAATTGATATAAGCAGAGTCCGAGGAGTTGTCGATAATGCTAACCAAATTTTAGAGATTAAGAAAGACTTTGGTTTATTTGACAAGTACATTTGGGGGTTTGTGAATCATAAACCCATCTCCACTCAATACAAGTTTGGCCACAAGATCCCAGTGAAGACATCAAAATCAGAGAGCATAAGCAAAGACATGGTCAGGAGGGGGTTTAGGTTCGTTGGCCCAACAGTGGTTCATTCATTCATGCAGGCAGCTGGCCTCACCAATGACCACTTAATCACATGCCACAGGCACTTGCAGTGCACCCTATTGGCAGCTCGCCCCCATTGCACCATAGAGCCCTCTCAATAG 1212 0.4274 MCSSKAKVTVGIEVVAAATTTTTTPLVARINGRPVLQPTCNRVPNLERRNSIKKMPPKSLSPPSPPLPSKTSLTPPVSPKSKSPRLPAIKRGNDNNGLNSSYEKIAIPRSSTKAPTLERKKSKSFKEGSCVSASIEASLSYSSSLITDSPGSIAAVRREQMALQQAQRKMKIAHYGRSKSAKFERVVPLDPSTTSLTSKTTEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSTLKKRLDFRAAFSEFDAETVANLTDKQMMSISSEYGIDISRVRGVVDNANQILEIKKDFGLFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLLAARPHCTIEPSQ 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1507 403 MobiDBLite consensus disorder prediction 93 107 - -
Ssu8g1507 403 SUPERFAMILY DNA-glycosylase 205 388 IPR011257 GO:0003824|GO:0006281
Ssu8g1507 403 MobiDBLite consensus disorder prediction 58 73 - -
Ssu8g1507 403 Gene3D Hypothetical protein; domain 2 204 388 - -
Ssu8g1507 403 MobiDBLite consensus disorder prediction 36 121 - -
Ssu8g1507 403 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 400 - -
Ssu8g1507 403 Pfam Methyladenine glycosylase 212 385 IPR005019 GO:0006284|GO:0008725
Ssu8g1507 403 PANTHER OS04G0501200 PROTEIN 1 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1507 Ssu-Chr8 30947312 30949561 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1507 8 30947312 30949561 Ssu2g0457 2 26408161 26410500 PCT