Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1404 ATGCTACCATCATCCCCTGTCCTATCTCTCGCCGGAACCGGCGCCGGCGTTCCGGTGAGTTTTTCCGGCGAACTGGGTTACCCCGAAACCAAGTGTTCTCCAAGACCGAGAAAGGTTTTCAGCTGCTCGTACATAAAGTGGCTTCCTTTACACCAACACACCATCAATGGTTTGAAATCGAAGAAGAGAAACTCAGTTCCGAGCTTCGCATTCGGTAAAAAAGCCGAAGACAGCTTTTTCTcgGATGTAAATGAAGACACCGATGATATGTACGAtgagttaattaataattatggaAAAGTGGTATTTAGTAGAAAAGACAAAAAGCCTGCTAGCGCAGAGATTGACGATGATGCTGAAAGCCTGTCATTTGCTGTCGAATTGGCCACGGTTGCAAGTGAGGTTAAGGCAGCAGATATAAAGGTCTTGTTTGTGAAGCCACTTATTTACTGGACTCGATTTTTTATCATAGCTACAGCATTTTCTCGTCCCCAGATTGATGCTATCGGGTCCAGAATTAGAGATCGAGCTGAGAAGAAATATGGAAAAATTCCAACTGGAGACACAAAACCCAACTCATGGACCCTGTTGGACTTTGGTGATGTAGTTGTCCACATTTTCCTTCCCTCGCACAGAGCTTTCTACAATTTGGAAGAGTTTTATGGTAATGCCACACCAGTAGAGCTGCCTTTTGAAAATCAACCACCATTTCGCAGTTGA 720 0.4333 MLPSSPVLSLAGTGAGVPVSFSGELGYPETKCSPRPRKVFSCSYIKWLPLHQHTINGLKSKKRNSVPSFAFGKKAEDSFFSDVNEDTDDMYDELINNYGKVVFSRKDKKPASAEIDDDAESLSFAVELATVASEVKAADIKVLFVKPLIYWTRFFIIATAFSRPQIDAIGSRIRDRAEKKYGKIPTGDTKPNSWTLLDFGDVVVHIFLPSHRAFYNLEEFYGNATPVELPFENQPPFRS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1404 239 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 128 221 IPR004394 -
Ssu8g1404 239 Gene3D Beta Polymerase, domain 2 120 230 IPR043519 -
Ssu8g1404 239 PANTHER PROTEIN IOJAP, CHLOROPLASTIC 4 237 - -
Ssu8g1404 239 PANTHER IOJAP SUPERFAMILY ORTHOLOG 4 237 IPR004394 -
Ssu8g1404 239 Hamap Ribosomal silencing factor RsfS [rsfS]. 119 222 IPR004394 -
Ssu8g1404 239 SUPERFAMILY Nucleotidyltransferase 121 231 IPR043519 -
Ssu8g1404 239 Pfam Ribosomal silencing factor during starvation 127 221 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1404 8 26910526 26915873 Ssu8g1404 8 26910526 26915873 ECH