LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu8g1403	ATGGCAGGCACTGGCCTGCCGTCTTTGGGCCGTGTGAAGCTTACTGATTTGGTTCCTTCGGAAGGGTTACCATCTGATTCCTATAAGATATCGGTTTCAATTTTGTCACAATCTCTGGCTCAGTTTTCGGCAGTCATCATCCAGTTTCCAGCAAGTGATGGTGCTCTTCTGAGATCTGGTTTAGAATCTGCTCGCCTCTATTTCCACCAAAGGGAAACATATCCACCTGCAGATATAATCCATACTAGCGAGTCTCGTGAGTGGTGCAAAACATCTGGTTATTATGCAGATCCTCATTTGTGGCAAGAAACCTATGATTATAGACCAGGATTGACTCCTTCAGAACCTAATAATTCAATAGAGTTCCCTCCGGCAGGTTTGCCAGACATATTTGCCTTATTTGGAAAAGCAGCTAGGGATATTCTGGATGCAATTGGCTACCATTTGAATTTGCGCAGCTCTCCGTTTGTAGAAATACTGGATAATGTTCCCCTGAGAAATAGTGAAATTTCATCTTCAGTCTTGTCTGTTTGCTGTCATGCTAGGCCATCATTTCACGGGACACAGCATCATAATATAACTACTCAAGAGGATGGCCAATTGATTATGTATCCTGACCATGATAACCAAGTTGATAAAAGCTTGCTATCGCTTGTTAAGTCCGACAGGGCAGGTTTACATGTAAGGGATTTTCAAGGCCGGTGGATTCTTGTGGATGGAGATCTGGGACCTCAAGAAGCTATTGTTTATCCTGGGCTTGCTCTTTATCAAGCAACTGCAGGATACGTAAACCCTGCATTGCACAAAACTGAGATTAATATGGAGGCTAATATGTATGGACGATGTTCTTTAGCCTTCAAACTTTTGCCTAAATCCATGACCAGTTTGGATTGTTCAGAAATGCGAGCGGCAGGTTATGGAATTGAAGCTCAGTTTCAGCTTCCTGTCCCAGTGGATGATTTTATGCAAAGATCTCATCCAACAGATCATCTCTTTAACAGGCCTGGTTTCCAGTGCTTCAATTTCCAACCAACACATGATGGATCTATGAAGACTTTGATGCGGAGAAGGAAGCAACCTCCCAAAAGCAAACCTTTGCCACCTTCCAAGAGGTTAAGGCTTGAGGCGCAGAGAGTTTTGAAAGAAAGGGTCCAGGATATTGCAGATAAGAAAGGCATTAAGCTGCGGTTCTGTAATCTCAAGGAATGTGAAAGTCACATTCACAGTGTAGATAGTCCATGTGCAAATATACGAATGGAGATAGGGTGGCCACTTGGTGTTCCATTTGTCCATCCCCATGATTTACCTAATAAGGCAAAGCTGGGTTTTCTTGAAGCATATGAACCTGGTTGGACAGAAGCCCATCAAAACTCAGACAGGCTAGTCAACACTCGGCTAACTTTAACTGTAACTCTCCTTTTGCAAGTTTCATGTCCATATGATCAtgcattttctactttttatttaaaactgtCGAGTAAAATAGTTGATCTAAAGCTGAGAATATGGATATTTTTTTCAGGGTGA	1527	0.4191	MAGTGLPSLGRVKLTDLVPSEGLPSDSYKISVSILSQSLAQFSAVIIQFPASDGALLRSGLESARLYFHQRETYPPADIIHTSESREWCKTSGYYADPHLWQETYDYRPGLTPSEPNNSIEFPPAGLPDIFALFGKAARDILDAIGYHLNLRSSPFVEILDNVPLRNSEISSSVLSVCCHARPSFHGTQHHNITTQEDGQLIMYPDHDNQVDKSLLSLVKSDRAGLHVRDFQGRWILVDGDLGPQEAIVYPGLALYQATAGYVNPALHKTEINMEANMYGRCSLAFKLLPKSMTSLDCSEMRAAGYGIEAQFQLPVPVDDFMQRSHPTDHLFNRPGFQCFNFQPTHDGSMKTLMRRRKQPPKSKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCNLKECESHIHSVDSPCANIRMEIGWPLGVPFVHPHDLPNKAKLGFLEAYEPGWTEAHQNSDRLVNTRLTLTVTLLLQVSCPYDHAFSTFYLKLSSKIVDLKLRIWIFFSG	508

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu8g1403	508	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED	1	464	-	-
	Ssu8g1403	508	PANTHER	2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN	1	464	-	-
	Ssu8g1403	508	Gene3D	-	61	329	IPR027443	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu8g1403	Ssu-Chr8	26905618	26907534	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu8g1403	8	26905618	26907534	Ssu8g1403	8	26905618	26907534	ECH