LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu8g1400	ATGGTGGATATGGATGGGTTTGGAGCTGGGGGTGGTGTTGATGGAGCTCCCAACGCAGAGAATCTCAGGGAATTGGGGAATGTTCCCTCAGAAGGTGCAGTTTTTGACGCATCGCAATATGCATTCTTCGGTAAGGATGTTGTCCAGGAAGTTGAGTTGGGAGGGTTGGAAGATGATGTCTGTTTGCCTACTGTTGAGTCTAATGAGGAGGAGTTCTTTTTCAATAGAGAAGAGGCTGAGGATGTAAGGTCTCTTTCTGATATTGATGATCTTACTACCACTTTTTTGAAGttGAACAAGTTCGTGAGTGGACCAAGAAGTGCAGGTGTTATTGGTGAACGAGGATCAAGAGAAAATTCTACTTCTGAATGGTCACAAAGGGAAGATAGTCTTAACTGGTTTGATCAGAATGCTTATGATAGTGAAGGTTCTACGGATGGCCAAAGATGGTCATCACAGCCCCATTCTTCCCTAGCCCATTTACATGATTCAAAGCCCTTGTACAGAACATCTTCATATCCTGAGCAGCAAAGGCAGGAGCAACACTACCACCTCCAACATTGCTCTAGTGAACCAGTTCCTAACTGGCTTGATCAGCATTTTTACGATATTGAAATTGCTCATGATCATGATGGCAAACGATGGTCATCACAGCCACATTCCTCCGTTGCACATTTACAAGAATCAAAGCCCTTGTACAGAGCATCTTCATATCCTGAAAAACAACAGGAGCTTCCTCGTTTTTCCAGTGAACCAATTTTGGTACCGAAGTCTTCATTTACTTCTTATCCTCCCCCTGGTGGTCTATCTCAGCTGGCTTCTCCAAGTCATAGTACAGGACACTTAAACATTCCTTATCATACTGGAGCAGCTCAGATGGCACTGTCATCTCAAAATCGTTCTCATTTCTCCAATTCTGCACTCCAGTCGAGTGCATTAAACCTCGGGTCACATTTTGGTGGAAACACACGCCAATTTCCTACCAGTTCCCCTCTTAATCAGCGAATACAGAATCAATTAGTCAACCAGGCAGGGTTGTATCCTGGAGATCATTCAAATCTCCTTAGTAATATGTTGCAGCAACAATTACACCTTCATAATGGATCTGTATCTCCTCACTTGATGACTCAATTACAACAACAGCAGCATAGACTGCATCATCCTGGTCAGCGATCTGCAGGCTACTTATCGGGCTTCCAGTCCCATTTATTCAATCCCCACCTTTCCTCTGGCTCATCCGTAATTAGCAAATATGAACATGTGCTTGGTCTTGCTGATGGTAGAGATCATAGACCAAAATCAACTCATAAAGGTAAACATAGCCTTCGTTTTTCCCAACATGGTTCTGATGCCAGTAGCCAGAAGAGTGACAGTGGTTCATTTCAGTTTCGGTCCAAGTATATGACAAGTGATGAAATTGAGAGCATTCTAAGAATGCAACTTGCTGTGACTCATAGTAATGACCCATATGTAGATGACTATTACCACCAAGCTTGTCTGGCAAAAAAACCTTCTGTGGCTAAGTTAAAACATCCATTTTGCCCAACCCAAATAAGGGAACTTCCTCCACGAACCCGTTCTAATGCTGAGCCACATGCATTTCTTCAGGTTGATGCCCTAGGGAGGGTTTCATTTTCATCTATTCGTCGACCTCGCCCTCTTCTTGATGTTGATCCTCCAAACACTTCTGTTAGCTCTGATCAAAAGATTTCTGAGAAGCCCCTTGAGCAGGAACCTAGGTTTGCTGCTAGAGTCACAATTGAGGATGGTCTTTGTCTTCTTCTTGATGTGGATGATATTGATCGTTACCTACAGTTTAATCAGCCACAAGATGGGGGAACACAATTAAGACGAAGAAGGCAGGTCCTGTTGGAAGGACTAGCAACTTCACTTCAACTTGTTGATCCACTGGGAAAGAATGGACACAAAGTCGGGCTTGCTGCGAAGGACGACCTTGTTTTCTTACGGTTGGCATCTCTTCCCAAGGGACGTAAGCTCCTTGCAAAATATCTTCAATTGCTTCTTCCTGGTAGCGAGTTTATGAGGATAGGCTGCATGACCGTCTTTCGTCATTTAAGATTCTTATTTGGTGGTCTCCCCTCAGATCCGGCAGCTTCAGAGACTACAAATAACCTTGCCAAGGTTGTTTGCCAATGTGTCCGAGGAATGGATCTTGGTGCTCTTAGTGCCTGCCTTGCAGCAGTAGTTTGTTCTGCAGAGCAGCCTCCTCTCCGTCCCATTGGAAGCACTTCCGGAGATGGTGCTTCCCTTATTTTAATATCCGTTCTTGAGAGGGCTGCTGAACTTTTAACTGATCCACATGCTGCTTGCAACTACAACATAGGTAATCGTCAATTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTCTCTCTAAGTATTGCATGAATAAATATCATAGTATCATGCAATCCATGCTTATACAAAGTACACCAAATGTGGATGACATCGGACCAGATGCTGCCAAAGCTATCAGTAGAGAAATGCCTGTTGAACTCTTGCGTGCTAGTCTCCCTCACACTGACAAGCGCCAGAGGAAGTTATTACTGGATTTCGCGCAGCGCTCCGTTCCTGTGGTTGGATTTAACAGCAACAGTGGAGGTAGTGGTGGTCATGTGAACTCAGAAACAGTGCTAAGTTGA	2664	0.4422	MVDMDGFGAGGGVDGAPNAENLRELGNVPSEGAVFDASQYAFFGKDVVQEVELGGLEDDVCLPTVESNEEEFFFNREEAEDVRSLSDIDDLTTTFLKLNKFVSGPRSAGVIGERGSRENSTSEWSQREDSLNWFDQNAYDSEGSTDGQRWSSQPHSSLAHLHDSKPLYRTSSYPEQQRQEQHYHLQHCSSEPVPNWLDQHFYDIEIAHDHDGKRWSSQPHSSVAHLQESKPLYRASSYPEKQQELPRFSSEPILVPKSSFTSYPPPGGLSQLASPSHSTGHLNIPYHTGAAQMALSSQNRSHFSNSALQSSALNLGSHFGGNTRQFPTSSPLNQRIQNQLVNQAGLYPGDHSNLLSNMLQQQLHLHNGSVSPHLMTQLQQQQHRLHHPGQRSAGYLSGFQSHLFNPHLSSGSSVISKYEHVLGLADGRDHRPKSTHKGKHSLRFSQHGSDASSQKSDSGSFQFRSKYMTSDEIESILRMQLAVTHSNDPYVDDYYHQACLAKKPSVAKLKHPFCPTQIRELPPRTRSNAEPHAFLQVDALGRVSFSSIRRPRPLLDVDPPNTSVSSDQKISEKPLEQEPRFAARVTIEDGLCLLLDVDDIDRYLQFNQPQDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRLASLPKGRKLLAKYLQLLLPGSEFMRIGCMTVFRHLRFLFGGLPSDPAASETTNNLAKVVCQCVRGMDLGALSACLAAVVCSAEQPPLRPIGSTSGDGASLILISVLERAAELLTDPHAACNYNIGNRQFWQASFDEFFGLLSKYCMNKYHSIMQSMLIQSTPNVDDIGPDAAKAISREMPVELLRASLPHTDKRQRKLLLDFAQRSVPVVGFNSNSGGSGGHVNSETVLS	887

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	142	159	-	-
	Ssu8g1400	887	PANTHER	PROTEIN PAT1 HOMOLOG	18	193	-	-
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	426	462	-	-
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	107	128	-	-
	Ssu8g1400	887	PANTHER	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	18	193	IPR039900	GO:0000290
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	263	284	-	-
	Ssu8g1400	887	PANTHER	PROTEIN PAT1 HOMOLOG	192	866	-	-
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	142	163	-	-
	Ssu8g1400	887	PANTHER	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	192	866	IPR039900	GO:0000290
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	114	128	-	-
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	551	575	-	-
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	256	284	-	-
	Ssu8g1400	887	MobiDBLite	consensus disorder prediction	445	462	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu8g1400	Ssu-Chr8	26808868	26817846	Dispersed/Tandem

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu8g1400	8	26808868	26817846	Ssu8g1400	8	26808868	26817846	ECH