Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1342 ATGATGAGACGTGGCAGTAATAACTTGAACACGTTGCATCTGCAGCATTCAGCAACTCCAGCAATGGCTGCTAGTTCTATCATCACACTCAAGCTCTCTTTCCTCTTGAGTCTCCTTCTCTCAGTTTCACTCTTGGGTGTCAGGTCACATACCCACCAAAATGCTGGGAGAGGGACAGTTCCTCCAACATGCAAGCGCATTGAGTGCCCCATCCATGATGTGATCGAAGTGGGTGATGGCTATGAAATCCGCCGCTATAACAATTCAACTGTGTGGATGTCAACTTCTCCCATTCAAGACATTTCTCTTGTTCAAGCCACAAGAACTGGTTTCAGGAGGCTATTTGACTATATTCAGGGCAAGAACGACTACAAGCAAAAAATTGAGATGACAGCGCCTGTGATCACAGAAGTTTCACCTAGTGATGGACCCTTTTGTGAATCCTCATTTGTTGTGAGCTTCTTTGTGCCAAAAGAGAACCAAGCAAACCCTCCTCCTGCAAAGGGTCTCCATGTCCAAAGATGGAACAATGTGTATGTAGCAGCAAGACAGTTTGGTGGATTTGTAACTGATTCAAATGTTGGGGTGGAAGCTGCTGCCTTGCGAGCTAGTATTGCAGGCACTGATTGGTCTGCTGCCATCGACAAAAGCCACAGAGCTGGTCATACTTCTGTTTACACTGTGGCACGATACAATGCCCCTTTTGAATATGATAATAGGGTGAATGAGATATGGTTCTTGTTTGACATGGAAAATGAGAGGCATGCAATGTGA 774 0.4535 MMRRGSNNLNTLHLQHSATPAMAASSIITLKLSFLLSLLLSVSLLGVRSHTHQNAGRGTVPPTCKRIECPIHDVIEVGDGYEIRRYNNSTVWMSTSPIQDISLVQATRTGFRRLFDYIQGKNDYKQKIEMTAPVITEVSPSDGPFCESSFVVSFFVPKENQANPPPAKGLHVQRWNNVYVAARQFGGFVTDSNVGVEAAALRASIAGTDWSAAIDKSHRAGHTSVYTVARYNAPFEYDNRVNEIWFLFDMENERHAM 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1342 257 Pfam SOUL heme-binding protein 67 246 IPR006917 -
Ssu8g1342 257 PANTHER HEME-BINDING PROTEIN-RELATED 22 257 IPR006917 -
Ssu8g1342 257 PANTHER F3F9.4 22 257 - -
Ssu8g1342 257 Gene3D Regulatory factor, effector binding domain 66 257 IPR011256 -
Ssu8g1342 257 SUPERFAMILY Probable bacterial effector-binding domain 60 248 IPR011256 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu8g1342 Ssu-Chr8 25125105 25126588 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1342 8 25125105 25126588 Ssu8g1342 8 25125105 25126588 ECH